Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Azadirachta_20indica_20[genbank_20GCA_5F000439995.3_202015-06-16] 126,142 sequences; 261,457,759 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq119621 105 4e-18 seq61388 102 5e-17 seq95098 98.7 7e-16 seq7711 95.1 8e-15 seq9706 89.7 3e-13 seq7293 86.0 4e-12 seq67990 84.2 1e-11 seq93401 82.4 5e-11 seq35333 82.4 5e-11 >seq119621 Length=933 Score = 105 bits (116), Expect = 4e-18 Identities = 162/230 (70%), Gaps = 1/230 (0%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| || | ||| | ||||| || || || ||| || || |||||||| || | Sbjct 260 ACCACCCCTGAGACGAAGGACCAAGTGCAGTGTAGACTCCTTCTGAATGTTGTAGTCAGC 201 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||||||||| | || || | ||| || || |||||||| | | ||||| || | || Sbjct 200 AAGTGTGCGTCCATCCTCAAGTTGCTTACCTGCAAAAATAAGCCTTTGCTGGTCCGGAGG 141 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACG-GTGTCGCTTGATTCCA 33700 | || || ||||| |||||| | || |||| ||| |||||| ||||| Sbjct 140 GATCCCCTCCTTGTCCTGAATTTTNGGCTTTGACATTATCAATTGTGTCGGAGCTTTCCA 81 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | |||| ||||||||||| || || | || |||||||||||||||||| Sbjct 80 CTTCAAGGGTGATCGTTTTTCCAGTGAGGGTCTTTACAAAGATCTGCATA 31 Score = 100 bits (110), Expect = 2e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | | ||| | |||||| || || || ||| ||||| ||||| || || | Sbjct 487 CCACCACGGAGACGAAGCACCAAGTGAAGGGTTGACTCCTTTTGGATGTTATAGTCAGCA 428 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || || | || || | |||||| || ||||||||||| | |||||| ||| | || Sbjct 427 AGAGTACGACCATCCTCAAGTTGTTTGCCAGCAAAAATCAACCTCTGCTGGTCTGGTGGG 368 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||| || ||||| ||||| | | || | ||| | ||||||| |||||| Sbjct 367 ATACCCTCCTTGTCCTGGATTTT-AGCCTTGACGTTGTCAATGGTGTCGGAGCTTTCCAC 309 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || | || || |||||||| || | |||||||||||||| |||||| Sbjct 308 TTCCAAAGTTATTGTTTTACCAGTCAGGGTTTTTACAAAGATTTGCATA 260 >seq61388 Length=1455 Score = 102 bits (112), Expect = 5e-17 Identities = 162/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| || | ||| | ||||| || || || ||| || || |||||||| || | Sbjct 591 ACCACCCCTGAGACGAAGGACCAAGTGCAGTGTAGACTCCTTCTGAATGTTGTAGTCAGC 650 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||||||||| | || || | ||| || || |||||||| | | ||||| || | || Sbjct 651 AAGTGTGCGTCCATCCTCAAGTTGCTTACCTGCAAAAATAAGCCTTTGCTGGTCCGGAGG 710 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACG-GTGTCGCTTGATTCCA 33700 | || || ||||| |||||| ||| | ||| ||| |||||| ||||| Sbjct 711 GATCCCCTCCTTGTCCTGAATTTTGGCTTTGA-CATTATCAATTGTGTCGGAGCTTTCCA 769 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | |||| ||||||||||| || || | || |||||||||||||||||| Sbjct 770 CTTCAAGGGTGATCGTTTTTCCAGTGAGGGTCTTTACAAAGATCTGCATA 819 Score = 100 bits (110), Expect = 2e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | | ||| | |||||| || || || ||| ||||| ||||| || || | Sbjct 364 CCACCACGGAGACGAAGCACCAAGTGAAGGGTTGACTCCTTTTGGATGTTATAGTCAGCA 423 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || || | || || | |||||| || ||||||||||| | |||||| ||| | || Sbjct 424 AGAGTACGACCATCCTCAAGTTGTTTGCCAGCAAAAATCAACCTCTGCTGGTCTGGTGGG 483 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||| || ||||| ||||| | | || | ||| | ||||||| |||||| Sbjct 484 ATACCCTCCTTGTCCTGGATTTT-AGCCTTGACGTTGTCAATGGTGTCGGAGCTTTCCAC 542 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || | || || |||||||| || | |||||||||||||| |||||| Sbjct 543 TTCCAAAGTTATTGTTTTACCAGTCAGGGTTTTTACAAAGATTTGCATA 591 Score = 100 bits (110), Expect = 2e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| || | ||| | |||| || || || ||| || || ||||| || || | Sbjct 819 ACCACCCCTGAGACGAAGGACCAGGTGAAGGGTTGACTCCTTCTGGATGTTATAGTCAGC 878 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || ||| | || || | |||||| || ||||| ||||| | ||||| ||| | || Sbjct 879 AAGGGTACGTCCATCCTCAAGTTGTTTGCCAGCAAAGATCAACCTTTGCTGGTCTGGTGG 938 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||| ||||| |||||| || | |||| ||| | ||||||| ||||| Sbjct 939 GATCCCTTCCTTGTCCTGAATTTT-TGCCTTTACATTGTCGATGGTGTCGGAGCTTTCCA 997 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | |||| ||||| || || || || | |||||||||||||| ||||| Sbjct 998 CCTCAAGAGTGATAGTCTTTCCAGTGAGGGTTTTTACAAAGATTTGCAT 1046 >seq95098 Length=1037 Score = 98.7 bits (108), Expect = 7e-16 Identities = 148/207 (71%), Gaps = 3/207 (1%) Strand=Plus/Plus Query 33546 ATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTG 33605 ||| || ||| ||| || |||||||||||||||| || ||||| | ||||| | ||| Sbjct 642 ATGCAGGGTGGACTCCTTCTGTATGTTGTAATCGGCCAGAGTGCGGCCATCGTCTAGTTG 701 Query 33606 TTTTCCGGCAAAAATCAAACGCTGCTGAT-CTTGCGGCACACCTTCTTTGTCGGCAATTT 33664 || ||||||||||||||||| ||||| | | | || | ||||| || || ||| | Sbjct 702 CTTGCCGGCAAAAATCAAACGTTGCTGGTCCNGGGGGAATTCCTTCCTTATCTTGAATCT 761 Query 33665 TCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCT 33723 | || | ||||| || | || ||| || || |||| || ||||| ||||| Sbjct 762 T-TGCCTTAACATTATCAATTGTATCGGAACTCTCAACTTCAAGAGTTATCGTCTTACCC 820 Query 33724 GTTAACGTTTTTACAAAGATCTGCATA 33750 |||| ||||| ||||| || |||||| Sbjct 821 GTTAGGGTTTTAACAAAAATTTGCATA 847 >seq7711 Length=5731 Score = 95.1 bits (104), Expect = 8e-15 Identities = 163/233 (70%), Gaps = 8/233 (3%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||| || |||| || ||||||| || ||||| || || || || |||||||| | Sbjct 526 ACCGCCCCTCAGGCGCAACACCAGGTGAAGAGTTGATTCCTTCTGAATATTGTAATCCGC 467 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || | | || |||| || ||||| ||||||||||||||||||||||| | || Sbjct 466 AAGAGTCCTCCCATCCTCCAGCTGCTTTCCAGCAAAAATCAAACGCTGCTGATCCGGTGG 407 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC---GCTTGATT 33697 | ||||| ||||| ||| || | || ||| | ||| | || || ||| | Sbjct 406 AATTCCTTCCTTGTCCTGAATCTT-GGCTTTAACGTTGTCAATCGTATCAGAGCT---CT 351 Query 33698 CCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 |||| || | || || ||||| ||||| | || || ||||||||||||||| Sbjct 350 CCACCTCCAAAGTAATTGTTTTCCCTGTCAGGGTCTTAACAAAGATCTGCATA 298 >seq9706 Length=10732 Score = 89.7 bits (98), Expect = 3e-13 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 33558 CTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAA 33617 ||| || || || |||||||||| | || ||| |||| || | || || |||||||| Sbjct 1022 CTCCTTCTGAATATTGTAATCGGCCAAAGTCCGTCCGTCCTCGAGCTGCTTGCCGGCAAA 1081 Query 33618 AATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACAT 33677 || | ||||||||| || | || | || || ||||| ||| ||| |||| ||| Sbjct 1082 GATGAGACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCTTGAATCTTCGCCTTCA-CAT 1140 Query 33678 AGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTA 33736 ||| | |||||| || ||||| || | ||| || || || || |||| ||||| | Sbjct 1141 TGTCGATGGTGTCCGAAGACTCCACCTCTAACGTAATGGTCTTCCCCGTTAGGGTTTTCA 1200 Query 33737 CAAAGATCTGCAT 33749 | ||||||||||| Sbjct 1201 CGAAGATCTGCAT 1213 >seq7293 Length=4729 Score = 86.0 bits (94), Expect = 4e-12 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600 ||||| || || || ||| || || |||||||| |||| || || || | || ||| Sbjct 4685 ACCAAGTGGAGGGTTGACTCCTTCTGAATGTTGTAGTCGGCAAGGGTACGGCCATCTTCC 4626 Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660 || || || ||||| |||||||| | |||||| || |||| | ||||| ||||| | Sbjct 4625 AACTGCTTCCCGGCGAAAATCAACCTCTGCTGGTCCGGCGGAATTCCTTCCTTGTCCTGA 4566 Query 33661 ATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719 || || || ||| | |||| ||||||| || || |||| ||||| || || Sbjct 4565 ATCTTAGCCTT-AACGTTGTCAATGGTGTCGGAACTCTCAACCTCAAGAGTGATGGTCTT 4507 Query 33720 ACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || || | || || || |||||||||||| Sbjct 4506 GCCGGTCAGAGTCTTAACGAAGATCTGCATA 4476 >seq67990 Length=6038 Score = 84.2 bits (92), Expect = 1e-11 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600 ||||| || || || ||| ||||| ||||||||||| | || || || | || ||| Sbjct 4560 ACCAAGTGAAGCGTTGACTCCTTTTGAATGTTGTAATCTGCAAGAGTTCGGCCATCTTCC 4501 Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTC 33656 |||||||| || ||||||||||| | ||||||||| | || | ||| || ||||| Sbjct 4500 AATTGTTTACCAGCAAAAATCAATCTCTGCTGATCCGGAGGGATACCCTCCTTGTC 4445 >seq93401 Length=1125 Score = 82.4 bits (90), Expect = 5e-11 Identities = 144/206 (70%), Gaps = 3/206 (1%) Strand=Plus/Minus Query 33546 ATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTG 33605 ||| |||||| ||||| || ||||||||||||| | ||||| | || |||||||| Sbjct 1104 ATGAAGAGTGGATTCTTTCTGGATGTTGTAATCGGCCAAGGTGCGGCCATCTTCCAATTG 1045 Query 33606 TTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTT 33665 || ||||| || |||| |||||||||||| | || | ||||| || || |||||| Sbjct 1044 CTTCCCGGCGAAGATCAGACGCTGCTGATCGGGAGGAATTCCTTCCTTATCTTGAATTTT 985 Query 33666 CTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTG 33724 | | || | ||| | || || || || |||| || ||||| || || | Sbjct 984 -GGCCTTGACGTTGTCGATCGTATCAGAACTCTCGACCTCAAGGGTAATCGTCTTCCCGG 926 Query 33725 TTAA-CGTTTTTACAAAGATCTGCAT 33749 ||| ||||| || ||||||||||| Sbjct 925 TTANGGGTTTTGACGAAGATCTGCAT 900 >seq35333 Length=5286 Score = 82.4 bits (90), Expect = 5e-11 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 33532 AAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGT 33591 ||||| | |||| ||| ||||| |||||||| ||||| || |||| | || || Sbjct 183 AAACGAAGAACCAGATGAAGAGTTGATTCTTTTTGGATGTTATAGTCGGCCAAGGTCCGG 124 Query 33592 TCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCT 33651 |||| |||||||| ||||||||||| ||||| | ||||| || |||| | ||||| Sbjct 123 CCGTCTTCCAATTGCTTTCCGGCAAAGATCAACCTTTGCTGGTCCGGCGGGATTCCTTCC 64 Query 33652 TTGTC 33656 ||||| Sbjct 63 TTGTC 59 Score = 82.4 bits (90), Expect = 5e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||| || |||||||| | |||| || ||||| || || || ||||||||||| | Sbjct 421 ACCTCCCCTCAAACGCAGAACCAGGTGAAGAGTCGATTCCTTCTGAATGTTGTAATCTGC 362 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || | | || || | ||||| || || || |||| |||||||||||| | || Sbjct 361 AAGGGTCCTGCCATCCTCAAGCTGTTTGCCAGCGAAGATCAGACGCTGCTGATCCGGTGG 302 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||| || || ||||| | | ||||| || | |||||| |||| Sbjct 301 GATTCCTTCCTTATCCTGGATTTT-GGCCTTAACATTATCAATTGTGTCGGAACTCTCCA 243 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | ||||| |||||||| || | ||||| || ||||||||||| Sbjct 242 CCTCCAAGGTGATTGTTTTACCCGTGAGTGTTTTAACGAAGATCTGCAT 194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328198665056640