Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Azadirachta_20indica_20[genbank_20GCA_5F000439995.3_202015-06-16] 126,142 sequences; 261,457,759 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq35333 109 4e-19 >seq35333 Length=5286 Score = 109 bits (120), Expect = 4e-19 Identities = 105/135 (78%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942 ||||| ||||| | ||| ||| |||||| |||| || ||||||||||| |||||||| Sbjct 59 GACAAGGAAGGAATCCCGCCGGACCAGCAAAGGTTGATCTTTGCCGGAAAGCAATTGGAA 118 Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 |||| || | |||| |||| || |||||||||||||| ||| | ||| ||||| | Sbjct 119 GACGGCCGGACCTTGGCCGACTATAACATCCAAAAAGAATCAACTCTTCATCTGGTTCTT 178 Query 28003 CGTTTGCGTGGCGGC 28017 ||||| ||||| ||| Sbjct 179 CGTTTACGTGGAGGC 193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355315312937634