Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Barbarea_20vulgaris_20[genbank_20GCA_5F001920985.1_202016-12-23] 7,810 sequences; 167,352,128 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq422 183 3e-41 seq144 174 2e-38 seq863 143 3e-29 seq3586 125 7e-24 seq308 122 9e-23 seq275 113 5e-20 seq1 111 2e-19 seq2666 104 2e-17 seq516 100 3e-16 >seq422 Length=101449 Score = 183 bits (202), Expect = 3e-41 Identities = 398/589 (68%), Gaps = 14/589 (2%) Strand=Plus/Minus Query 116612 ATTTTCCCCATACAATACCCGGACATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTC 116671 || ||||| || ||||| || | || ||| ||||||||||| ||||| || || ||| Sbjct 44342 ATGTTCCCAATCCAATATCCTCAGATATGGGAGATGTACAAAAAAGCCGAAGCTTCATTC 44283 Query 116672 TGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACGAGCGACTGGGAGCG---CTTGAAC 116728 ||||||| ||| || || || || || | || | |||||||||| ||| ||| Sbjct 44282 TGGACCGCCGAAGAAGTCGATCTATCTCAAGATAATCGCGACTGGGAAAATTCCTTAAAC 44223 Query 116729 GACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATC 116788 ||| |||| || || |||||||| ||||| || ||||| |||||||| ||||||||| Sbjct 44222 GACGACGAACGACACTTCATCAAACACGTACTCGCCTTCTTCGCCGCATCAGACGGCATC 44163 Query 116789 GTCAACGAGAATCTGGTCGA-GCGTTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTG 116847 || |||||||| || | || ||| || || ||| | ||||||| || Sbjct 44162 GTTTTAGAGAATCT-ATCAACCCGATTCATGTCCGATGTTCAGATCTCCGAGGCTCGTGC 44104 Query 116848 CTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCGGAAATGTATTCGACCCTCAT 116907 ||| ||||| ||||| ||||| || ||||| | ||||| || |||||| ||| | Sbjct 44103 CTTTTACGGATTTCAAATCGCGATTGAGAATATTCACTCTGAGATGTATAGTCTCCTTCT 44044 Query 116908 CGACACGTACGTGCGCTCTTCGGAGGAGA-AGCTCCGTTTGTTGAACGCCATCGAGACGA 116966 ||| || || | | | |||| || | | | | || ||| || || || | Sbjct 44043 CGATACTTATATCAAAGATAACAAAGAGAGAGAT-CATCTCTTCCGCGCAATTGAAACCA 43985 Query 116967 TGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGG--CAGAGAGGC 117024 | || || || | |||| || | |||||| || ||||||| ||| | | || Sbjct 43984 TTCCTTGTGTAACGAAGAAAGCACAATGGGCGATGAAATGGATCGACGGATCTCAAAG-- 43927 Query 117025 CGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAG 117084 ||||| || || | ||||| || || ||| || || ||||||| || || || Sbjct 43926 ---CTTCGCTGAACGAATCGTGGCTTTTGCTTGCGTTGAAGGTATCTTCTTCTCCGGTAG 43870 Query 117085 TTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAA 117144 || | || || ||| | |||||||| || | ||||| || || |||||| ||| Sbjct 43869 CTTTTGTTCTATTTTCTGGTTGAAGAAACGAGGTTTAATGCCTGGACTTACTTTCTCCAA 43810 Query 117145 CGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTG 117193 ||| || ||||| || ||||| ||||| ||||| || || || |||||| Sbjct 43809 CGAACTGATCTCAAGAGACGAAGGTCTTCATTGTGATTTCGCTTGTTTG 43761 >seq144 Length=115930 Score = 174 bits (192), Expect = 2e-38 Identities = 441/662 (67%), Gaps = 13/662 (2%) Strand=Plus/Plus Query 116612 ATTTTCCCCATACAATACCCGGACATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTC 116671 || || || || || ||||| | || ||| ||||| || || ||||| || |||||| Sbjct 55523 ATGTTTCCGATTCACTACCCACAGATCTGGGAGATGTATAAGAAAGCCGAAGCATCGTTC 55582 Query 116672 TGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACGAGCGACTGGGAGCGCTTGAACGAC 116731 ||||||| ||| || || || || || | ||| |||| |||||| | |||||| Sbjct 55583 TGGACCGCCGAAGAAGTCGATCTATCACAAGACGGACGCGATTGGGAGAATCTAAACGAC 55642 Query 116732 AACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTC 116791 || || || |||||||| ||||| || || || |||||||| ||||| ||||| Sbjct 55643 GGTGAACGTCACTTCATCAAACACGTCCTCGCTTTCTTCGCCGCATCAGACGGTATCGTT 55702 Query 116792 AACGAGAATCTGGTCGAGCGTTTC-GCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGC-T 116849 |||||||| | || ||| ||| || || || || | ||||||| |||| | Sbjct 55703 TTAGAGAATCTCGCTTCACGATTCATGTCA-GATGTTCAAGTCTCGGAGGCGC-GTGCTT 55760 Query 116850 TCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCG 116909 ||||||| || |||||||| || ||||| | || || || |||||| ||| ||| Sbjct 55761 TCTACGGATTCCAGATCGCGATTGAGAATATTCATTCCGAGATGTATAGTCTCCTTCTCG 55820 Query 116910 ACACGTACGTGCGCTCTTCGGAGGAGA-AGCTCCGTTTGTTGAACGCCATCGAGACGATG 116968 | |||||| | | | |||| || | | | | || ||| || || || || Sbjct 55821 ATACGTACATCAAAGATAACAAAGAGAGAGAT-CATCTCTTCCGCGCGATTGAAACCATT 55879 Query 116969 CCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGG--CAGAGAGGCCG 117026 || |||||| |||| || |||||||| || ||||||| ||| | | | Sbjct 55880 CCTTGCGTCGCGAAGAAAGCACAGTGGGCGATGACTTGGATCGACGGATCTCAAA----- 55934 Query 117027 CCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTT 117086 |||||| || || | || || ||||| ||| || || ||||||| || || || | Sbjct 55935 CCTTCGCTGAACGAATCGTAGCTTTCGCTTGCGTTGAAGGTATCTTCTTCTCCGGTAGCT 55994 Query 117087 TCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACG 117146 || | |||| || ||||| |||||||| || |||||||| || | || ||| |||| Sbjct 55995 TCTGCTCCATCTTCTGGCTTAAGAAACGAGGACTCATGCCTGGTTTAACCTTCTCTAACG 56054 Query 117147 AGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATT 117206 | | ||||| | ||||| || | || ||||| || || || | || | || || | Sbjct 56055 AATTGATCTCTCGAGACGAAGGCTTACACTGCGATTTCGCTTGCCTCCTCTACACGCTCT 56114 Query 117207 TGGTGCAGCGACCGAGCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCG 117266 || | | | || | || |||||| | | |||||| |||||| |||| |||| Sbjct 56115 TGAGGACGAAGCTGACGGAGGAGCGCGTGAAGTCAATCGTCTGCGACGCCGTCGAGATCG 56174 Query 117267 AG 117268 || Sbjct 56175 AG 56176 >seq863 Length=117140 Score = 143 bits (158), Expect = 3e-29 Identities = 160/214 (75%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745 ||| ||||| || ||||| ||||| || ||||| || ||||||||| | || ||||| | Sbjct 77865 AAAGATGCAGATCTTCGTGAAAACCCTAACGGGTAAGACCATCACCCTTGAGGTCGAGTC 77806 Query 40746 CACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 | | |||| | | | | |||| | || || | ||||| ||||| ||||| |||| Sbjct 77805 CTCTGACACCATCGACAATGTCAAAGCGAAGATCCAAGACAAGGAGGGAATCCCACCGGA 77746 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 |||||| ||| | || | ||| || |||||||| || |||| || || ||| |||||| Sbjct 77745 CCAGCAGCGATTGATTTTCGCCGGGAAACAGCTCGAAGACGGCCGTACTCTCGCCGACTA 77686 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 ||||||||||||||| | ||||| ||||| ||| Sbjct 77685 CAACATCCAGAAGGAATCGACGCTTCATCTGGTG 77652 >seq3586 Length=17470 Score = 125 bits (138), Expect = 7e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || ||||| ||||||||||| || | || ||||| | | Sbjct 5765 ATGCAGATCTTTGTTAAGACCCTCACCGGCAAAACCATTACGTTGGAGGTCGAGAGCTCA 5824 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | |||||| || |||| ||||| || || ||||| |||||||| Sbjct 5825 GACACTATCGATAATGTCAAGGCTAAGATTCAGGACAAGGAAGGAATCCCTCCGGACCAG 5884 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||| ||||||||| ||| || || ||||| || || | ||||| ||| ||||||||| Sbjct 5885 CAAAGACTCATCTTCGCTGGTAAGCAGCTTGAGGATGGTCGCACACTCGCTGACTACAAC 5944 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||| | || || || || || Sbjct 5945 ATCCAGAAGGAGTCGACCCTCCACCTTGT 5973 Score = 118 bits (130), Expect = 1e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || ||||| || || || |||||||| ||| |||| || || | | Sbjct 5993 ATGCAGATCTTTGTCAAAACTCTAACAGGGAAAACCATTACCCTCGAGGTTGAGAGCTCA 6052 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | |||||| || || | || |||||||| ||||| |||||||| Sbjct 6053 GACACAATCGACAATGTCAAGGCTAAGATCCAAGATAAAGAGGGAATCCCACCGGACCAG 6112 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | || |||| ||| || |||||||| || || | ||||| || ||||||||| Sbjct 6113 CAGAGGCTTATCTTCGCTGGGAAACAGCTTGAGGATGGTCGCACACTGGCTGACTACAAC 6172 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||||||||||| | || || || || |||||||| Sbjct 6173 ATCCAGAAGGAATCAACCCTTCACCTTGTGTTGCG 6207 Score = 109 bits (120), Expect = 6e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || ||||| |||||||||||||| | || ||||| | | Sbjct 5537 ATGCAGATCTTTGTCAAGACCCTCACCGGCAAAACCATCACTTTGGAGGTCGAGAGCTCT 5596 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | |||||| || || | ||||| || || ||||| |||| ||| Sbjct 5597 GACACTATTGATAATGTCAAGGCTAAGATCCAGGACAAGGAAGGTATCCCTCCGGATCAG 5656 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || |||| |||| || || || ||||| || || | ||||| ||| ||||||||| Sbjct 5657 CAGAGACTTATCTTTGCCGGTAAGCAGCTTGAGGATGGTCGCACACTCGCTGACTACAAC 5716 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||||| |||||| |||| || ||| | || | || |||| || ||| Sbjct 5717 ATCCAAAAGGAGTCCACTCTTCATTTGGTTCTTCGTCTGAGAGGTGGC 5764 Score = 102 bits (112), Expect = 8e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||| | ||||| ||||| ||||| ||||| |||||||| |||| ||||| | | Sbjct 5309 ATGCAAGTTTTCGTGAAAACACTCACTGGCAAGACCATCACTCTCGATGTCGAGAGCTCT 5368 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | | | | |||| ||| |||| || || || ||||| || |||| ||| Sbjct 5369 GATACCATCGACAATGTTAAGGCAAAGATTCAGGATAAGGAAGGCATTCCTCCGGATCAG 5428 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||| | | |||| ||| || |||||||| || || | || ||| | ||| |||||| Sbjct 5429 CAAAGGTTGATCTTCGCCGGAAAACAGCTAGAAGATGGCCGTACCTTGGCCGATTACAAC 5488 Query 40870 ATCCAGAAGGA 40880 |||||||| || Sbjct 5489 ATCCAGAAAGA 5499 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || || || | || ||||| || || ||| | || || || | | Sbjct 6221 ATGCAAATCTTTGTGAAGACTTTGACAGGCAAGACTATTACCTTGGAGGTTGAGAGCTCA 6280 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||| || |||| ||||| || || ||||| ||||||| Sbjct 6281 GACACAATTGATAATGTTAAGGCTAAGATTCAGGACAAGGAAGGGATCCCTCCGGACCAA 6340 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || ||||||||| ||| || |||||||| || || | || || | || |||||| Sbjct 6341 CAGAGACTCATCTTCGCTGGAAAACAGCTCGAGGATGGTCGGACTTTGGCTGATTACAAC 6400 Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892 |||||||||||| | || ||||| Sbjct 6401 ATCCAGAAGGAGTCGACCCTGCA 6423 >seq308 Length=205501 Score = 122 bits (134), Expect = 9e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||||||||| || ||||| ||||| ||||||||||| ||| | || || || | | Sbjct 131391 ATGCAAATATTTGTGAAAACCCTCACTGGCAAAACCATTACCCTAGAAGTTGAGAGCTCT 131332 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| ||| | | | || | || |||| ||||| || || ||||| ||||||| Sbjct 131331 GACACCGTTGACAATGTTAAAGCTAAGATTCAAGACAAGGAAGGAATCCCTCCGGACCAA 131272 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || ||||||||| || || |||||||| || || | ||||| || ||| |||||| Sbjct 131271 CAGAGACTCATCTTTGCTGGTAAACAGCTTGAGGATGGTCGCACTCTTGCCGATTACAAC 131212 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||| || | || || ||| | ||| | || |||| || || Sbjct 131211 ATCCAGAAAGAATCAACCCTTCATTTGGTGCTTCGTCTGAGAGGAGG 131165 Score = 96.9 bits (106), Expect = 4e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || || || |||||||| || | || || || | | Sbjct 130935 ATGCAGATTTTTGTTAAGACCCTTACCGGAAAAACCATAACTTTGGAAGTGGAGAGCTCG 130876 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| || | | | ||| |||||| | ||||| || || ||||| ||||||| Sbjct 130875 GACACAGTCGACAATGTGAAGACAAAAATCCAAGACAAGGAAGGGATCCCTCCGGACCAA 130816 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || ||||||||| ||| || |||||||| || || | || || || || |||||| Sbjct 130815 CAGAGACTCATCTTCGCTGGTAAACAGCTTGAGGATGGTCGAACTCTTGCTGATTACAAC 130756 Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892 |||||||||||| | || ||||| Sbjct 130755 ATCCAGAAGGAGTCAACCCTGCA 130733 Score = 93.3 bits (102), Expect = 4e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || || || || || || || ||||| || | || || ||| | | Sbjct 131619 ATGCAAATCTTTGTTAAGACTCTTACAGGGAAGACCATTACTCTTGAGGTTGAAAGCTCT 131560 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| |||||| ||| || | || ||||| || ||||| ||||||| Sbjct 131559 GACACTATTGATAACG-TCAAGGCAAAGATCCAAGATAAAGAAGGAATCCCTCCGGACCA 131501 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | ||||||| || || || ||||| || || | || || || || ||||| Sbjct 131500 GCAGAGGCTCATCTTTGCTGGTAAGCAGCTCGAGGATGGCCGGACTCTTGCGGATTACAA 131441 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||| | || || || || || Sbjct 131440 CATCCAGAAGGAGTCAACACTTCACCTTGT 131411 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || || || |||||||| || | || || || | | Sbjct 130707 ATGCAGATTTTTGTCAAGACCCTAACCGGAAAAACCATAACTTTGGAGGTTGAGAGCTCA 130648 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| || | | | |||| ||| |||| |||||||| || ||||| | ||||| Sbjct 130647 GACACTGTAGATAATGTGAAGGCAAAGATTCAAGACAAAGAAGGGATCCCACCAGACCAA 130588 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || ||||||||| || || || ||||| || || | || || || ||||||||| Sbjct 130587 CAGAGACTCATCTTTGCTGGTAAGCAGCTTGAGGATGGTCGTACTCTTGCAGACTACAAC 130528 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||| || ||| | || || || || || Sbjct 130527 ATCCAAAAAGAGTCGACTCTTCACCTTGT 130499 >seq275 Length=143682 Score = 113 bits (124), Expect = 5e-20 Identities = 156/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||||||||| || || ||||| || || || |||||| | || ||||| | | Sbjct 123446 ATGCAAATATTCGTGAAGACTCTCACCGGGAAGACAATCACCCTTGAAGTCGAGAGCTCT 123505 Query 40750 GACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| || |||| |||| | || || | || || || || || || ||||||| Sbjct 123506 GACACTATTGACAACG-TCAAAGCCAAGATCCAGGATAAGGAAGGTATTCCTCCGGACCA 123564 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| || || ||||| || || | |||||| | ||| ||||| Sbjct 123565 GCAGCGTCTCATCTTCGCTGGAAAGCAGCTTGAGGATGGTCGCACCTTGGCCGATTACAA 123624 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||| || |||||| | || || ||| | |||||||| Sbjct 123625 CATTCAAAAGGAGTCAACCCTTCATTTGGTGTTGCG 123660 Score = 107 bits (118), Expect = 2e-18 Identities = 149/205 (73%), Gaps = 3/205 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTC-ACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 ||||| || ||||| || || || || || || ||||||||| | || || || | | Sbjct 123674 ATGCAGATCTTCGTGAAGACTCTTGACCGGAAAGACCATCACCCTTGAGGTTGAGAGCTC 123733 Query 40749 CGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 |||| | | | |||| |||||| || || | ||||| || || ||||| |||||| Sbjct 123734 TGACACCATCGACAACG-TCAAGGCCAAGATCCAGGACAAGGAAGGTATCCCTCCGGACC 123792 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 |||| || ||||||| ||| || |||||||| || || | ||||| | ||||||| Sbjct 123793 AGCAGCGTCTCATCTTCGCTGGAAAACAGCTTGAGGATGGTCGCACATTGGCTGACTACA 123852 Query 40868 ACATCCAGAAGGAGGCCACGCTGCA 40892 ||||||| |||||| | || ||||| Sbjct 123853 ACATCCAAAAGGAGTCGACTCTGCA 123877 Score = 105 bits (116), Expect = 7e-18 Identities = 151/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| ||||| || || || || || ||||| | || || || | | Sbjct 139100 ATGCAAATCTTCGTCAAAACCCTAACCGGAAAGACTATCACTCTTGAGGTGGAGAGCTCT 139159 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| |||||| || || | || || ||||| ||||| ||||||| Sbjct 139160 GACACCATCGACAACG-TCAAGGCTAAGATCCAAGATAAGGAGGGTATCCCACCGGACCA 139218 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||| || | |||| ||| || || || || || |||| || || | |||||||| Sbjct 139219 GCAAAGATTGATCTTCGCCGGAAAGCAACTCGAGGACGGCCGTACTTTAGCTGACTACAA 139278 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||| ||||||||| | || || |||||||| Sbjct 139279 CATTCAGAAGGAGTCGACCCTTCATCTAGT 139308 Score = 96.9 bits (106), Expect = 4e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | || || || |||||||| | || || || | | Sbjct 123903 ATGCAGATTTTCGTGAAGACTTTGACCGGAAAGACCATCACACTGGAGGTGGAGAGCTCA 123962 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | | |||| || || | ||||| || |||||||| |||| ||| Sbjct 123963 GACACCATTGATAATGTTAAGGCCAAGATCCAGGACAAGGAAGGCATCCCTCCGGATCAG 124022 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || ||||||| ||| || || ||||| || || | ||||| || ||||||||| Sbjct 124023 CAGCGTCTCATCTTCGCTGGAAAGCAGCTTGAGGATGGTCGCACACTTGCTGACTACAAC 124082 Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892 |||||||||||| | || || || Sbjct 124083 ATCCAGAAGGAGTCAACCCTTCA 124105 Score = 95.1 bits (104), Expect = 1e-14 Identities = 152/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | || || || ||||| ||| |||| || || | | Sbjct 139556 ATGCAGATCTTCGTCAAGACCTTGACTGGTAAGACCATTACCCTCGAGGTGGAGAGCTCT 139615 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| | || | || || | ||||||||||| ||||| ||||||| Sbjct 139616 GACACCATTGACAACG-TGAAAGCCAAGATCCAAGACAAAGAGGGTATCCCACCGGACCA 139674 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | | |||| ||| || || ||||| || || | || ||| | ||| ||||| Sbjct 139675 GCAGAGGTTGATCTTCGCCGGAAAGCAGCTTGAGGATGGTCGTACCTTGGCCGATTACAA 139734 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 |||||||||||| | || || ||| | || ||||| Sbjct 139735 TATCCAGAAGGAGTCAACCCTTCATTTGGTCTTGCG 139770 Score = 91.5 bits (100), Expect = 2e-13 Identities = 144/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| || || ||||||||| |||| || ||| | | Sbjct 138872 ATGCAGATCTTCGTTAAGACTCTCACCGGAAAGACCATCACCCTCGAGGTGGAAAGCTCT 138931 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| | |||| || || | || || || || || || |||| || Sbjct 138932 GACACCATCGACAACGTT-AAGGCCAAGATCCAGGATAAGGAAGGTATTCCTCCGGATCA 138990 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | || |||| ||| || || ||| |||| |||| || || | |||||||| Sbjct 138991 GCAGAGGCTTATCTTCGCCGGAAAGCAGTTGGAGGACGGCCGTACTTTGGCTGACTACAA 139050 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||| |||| || || Sbjct 139051 TATCCAGAAGGAATCCACCCTCCA 139074 Score = 89.7 bits (98), Expect = 5e-13 Identities = 151/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | || || || ||||| ||| |||| || || | || Sbjct 123218 ATGCAGATCTTCGTCAAGACCTTGACTGGTAAGACCATTACCCTCGAGGTGGAGAGCTCC 123277 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| | || | || || | ||||||||||| ||||| ||||||| Sbjct 123278 GACACCATTGACAACG-TGAAAGCCAAGATCCAAGACAAAGAGGGTATCCCACCGGACCA 123336 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | | |||| ||| || || ||||| || || | || ||| | ||| ||||| Sbjct 123337 GCAGAGGTTGATCTTCGCCGGAAAGCAGCTTGAGGATGGTCGTACCTTGGCCGATTACAA 123396 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 || ||||||||| | || || || | || ||||| Sbjct 123397 TATTCAGAAGGAGTCAACCCTTCACTTGGTCTTGCG 123432 Score = 89.7 bits (98), Expect = 5e-13 Identities = 151/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || | || || || || ||||| | || || || | Sbjct 139328 ATGCAAATCTTCGTTAAGACCTTGACCGGAAAGACTATCACTTTGGAGGTGGAGAGTTCT 139387 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| | || | ||||| | ||||| ||||| ||||| ||||||| Sbjct 139388 GACACCATCGACAACG-TGAAAGCTAAAATCCAAGACAAGGAGGGAATCCCACCGGACCA 139446 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || | |||| ||| || || || || || |||| || || | |||||||| Sbjct 139447 GCAGAGATTGATCTTCGCCGGAAAGCAACTTGAGGACGGCCGTACTTTGGCTGACTACAA 139506 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||||||||||||| | || || ||| | || ||||| Sbjct 139507 CATCCAGAAGGAGTCTACACTTCATTTGGTCTTGCG 139542 >seq1 Length=111110 Score = 111 bits (122), Expect = 2e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745 ||||||||| || ||||| ||||| || ||||| || || || ||| | || || ||| | Sbjct 60417 AAAAATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACGATAACCCTAGAGGTTGAATC 60476 Query 40746 CACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 | |||| | | | | |||| || || | ||||| || || ||||| |||| Sbjct 60477 ATCGGACACAATCGACAATGTGAAGGCGAAGATCCAAGACAAGGAAGGAATCCCACCGGA 60536 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 ||||| || || |||| ||| || || || ||||| |||| | || ||| ||| || Sbjct 60537 TCAGCAGCGTCTGATCTTCGCCGGGAAGCAACTGGAAGACGGAAGGACACTCGCCGATTA 60596 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||| ||| | ||||| ||| | ||| | || |||| || || Sbjct 60597 CAACATCCAGAAAGAGTCGACGCTTCATTTGGTGCTCCGTCTGAGAGGAGG 60647 >seq2666 Length=20083 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || ||||| || || ||||||||||| ||| | || || || | | Sbjct 9508 ATGCAGATTTTTGTGAAAACCCTAACTGGCAAAACCATAACCCTAGAAGTTGAGAGCTCT 9449 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| ||| | | |||||| || |||| ||||||||| || |||| || ||||| Sbjct 9448 GACACCGTTGACAATGTCAAGGCCAAGATTCACGACAAAGAAGGGATCCAAGCAGACCAA 9389 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || |||| |||| ||| ||||| || || || || | | ||| || ||||| ||| Sbjct 9388 CAGAGACTTATCTTCGCTGGCAAGCAACTTGAAGATGGTCACACTCTTGCAGACTATAAC 9329 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 ||||| ||||| | || || || || ||| Sbjct 9328 ATCCAAAAGGAATCAACACTTCACCTTGTG 9299 >seq516 Length=37039 Score = 100 bits (110), Expect = 3e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || ||||| || || ||||||||||| || | || || || | | Sbjct 10216 ATGCAGATTTTTGTGAAAACCCTAACTGGCAAAACCATAACTTTGGAGGTTGAGAGCTCA 10157 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||| ||| |||| |||||||| || ||||| | ||||| Sbjct 10156 GACACAATAGATAATGTAAAGGCAAAGATTCAAGACAAAGAAGGGATCCCACCAGACCAA 10097 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||| ||||||||| || || || ||||| || || | || || || ||||||||| Sbjct 10096 CAAAGACTCATCTTTGCTGGTAAGCAGCTTGAGGATGGTCGTACTCTTGCAGACTACAAC 10037 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||||| ||||| | || || || || ||| |||| Sbjct 10036 ATCCAAAAGGAATCAACACTTCACCTTGTGCTGCG 10002 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515168901725600