Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Barbarea_20vulgaris_20[genbank_20GCA_5F001920985.1_202016-12-23] 7,810 sequences; 167,352,128 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq210 111 1e-19 seq1002 82.4 5e-11 >seq210 Length=153681 Score = 111 bits (122), Expect = 1e-19 Identities = 127/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 97072 TGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAGTGACATGGGCGATC 97131 |||||||| || | | || ||||| || |||||||| | |||| || || |||| | Sbjct 139817 TGAGCATCCCCAATAACATGGATAAAATCACCAGGAACAAGATCACACACGTGAGCGAGC 139758 Query 97132 ATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCCCATATCAGCT 97191 |||||||| | ||||| ||| |||||||||||| || || || || ||||| || ||| Sbjct 139757 ATACAAGTAAGAAGAGAGTAGGAAGCAATGTTAAACGGTACACCAAGGCCCATGTCCGCT 139698 Query 97192 GATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAAAACTGA 97242 || | ||||| | ||||| || || | ||| || ||||||||||||| Sbjct 139697 GAACGCTGATACATTTGACATGAGAGTTCTCCTTCTGCCACATAAAACTGA 139647 >seq1002 Length=111223 Score = 82.4 bits (90), Expect = 5e-11 Identities = 54/60 (90%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 97408 GCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCA 97467 || |||||||| |||||||| ||||||||||| ||||||||||| ||||| ||||||||| Sbjct 95786 GCACCAAAATGTCTCCATTGAAATCCATAAACGGGTCCAAGGTCACCTTCCTCTCTATCA 95727 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346750991581700