Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Barbarea_20vulgaris_20[genbank_20GCA_5F001920985.1_202016-12-23] 7,810 sequences; 167,352,128 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq422 174 4e-38 seq308 161 2e-34 seq144 136 9e-27 seq3586 131 4e-25 seq516 129 1e-24 seq1 127 5e-24 seq1061 125 2e-23 seq683 120 7e-22 seq275 107 4e-18 >seq422 Length=101449 Score = 174 bits (192), Expect = 4e-38 Identities = 411/603 (68%), Gaps = 17/603 (3%) Strand=Plus/Minus Query 268694 CCAGATAGATT-TGTGATATTTCCAATACAGCATGGTGATATATGGAGGATGTACAAACA 268752 |||||| |||| ||| || || ||||| || || | | |||||| |||||||||| | Sbjct 44357 CCAGATCGATTCTGT-ATGTTCCCAATCCAATATCCTCAGATATGGGAGATGTACAAAAA 44299 Query 268753 GGCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGACTTAATAG--AT 268810 |||| ||||| || ||||| | |||||||| ||||| ||| | || |||| | | Sbjct 44298 AGCCGAAGCTTCATTCTGGACCGCCGAAGAAGTCGATCTATCTCAAGA--TAATCGCGAC 44241 Query 268811 TGGAAAAATT--TAAAACCA-GAAGAAAGAAGATTTATATCTTATATTCTTGCGTTTTTT 268867 ||| |||||| | |||| | || ||| || || || | | || || || || Sbjct 44240 TGGGAAAATTCCTTAAACGACGACGAACGACACTTCATCAAACACGTACTCGCCTTCTTC 44181 Query 268868 GCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTC-TGTCAAGAGGTACA 268926 || | || || |||||| || |||||| | ||| |||| || || || Sbjct 44180 GCCGCATCAGACGGCATCGTTTTAGAGAATCTATCAACCCGATTCATGTCC-GATGTTCA 44122 Query 268927 GATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCATTCAGA 268986 ||| | || || | ||||||||||| || || || || || |||||||| || || Sbjct 44121 GATCTCCGAGGCTCGTGCCTTTTACGGATTTCAAATCGCGATTGAGAATATTCACTCTGA 44062 Query 268987 GATGTACAGTCTATTAATAGATACTTATATAGATGATAACAACGAAAAGAAAAGA-CTAT 269045 |||||| ||||| | | ||||||||||| | |||||||| || | || | | || | Sbjct 44061 GATGTATAGTCTCCTTCTCGATACTTATATCAAAGATAACAAAGAGA-GAGATCATCTCT 44003 Query 269046 TTTCTTCTATGAGAACTATGGACTGTGTGAGaaaaaaaTCTGAATGGGCTCTGAAATGGA 269105 | | || ||| || ||||| | || ||| | ||||||| ||||||||| Sbjct 44002 TCCGCGCAATTGAAACCATTCCTTGTGTAACGAAGAAAGCACAATGGGCGATGAAATGGA 43943 Query 269106 TAAACG-ATAGCGCGCCTTACGGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATA 269164 | ||| || | ||| || ||| | | || |||||||| || |||||||| Sbjct 43942 TCGACGGATCTCAAAGCTT-CGCTGAACGAATCGTGGCTTTTGCTTGCGTTGAAGGTATC 43884 Query 269165 TTCTTTTCGGGGT-CTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGG 269223 ||||| || || |||||| |||| || |||||||||||| |||| | ||||| || Sbjct 43883 TTCTTCTCCGGTAGCTTTTGTT-CTATTTTCTGGTTGAAGAAACGAGGTTTAATGCCTGG 43825 Query 269224 ATTAACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACACTGCGACTTCGCTTG 269283 | | |||||||| |||||| |||| || ||||||||| | || || || |||||||| Sbjct 43824 ACTTACTTTCTCCAACGAACTGATCTCAAGAGACGAAGGTCTTCATTGTGATTTCGCTTG 43765 Query 269284 TTT 269286 ||| Sbjct 43764 TTT 43762 >seq308 Length=205501 Score = 161 bits (178), Expect = 2e-34 Identities = 176/231 (76%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||| || | ||| || | ||| | || ||||||||||| || || || || Sbjct 131162 ATACCTCCTCTCAGACGAAGCACCAAATGAAGGGTTGATTCTTTCTGGATGTTGTAATCG 131221 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | ||||| | ||| || || || ||||| |||||||| || || |||||||| || ||| Sbjct 131222 GCAAGAGTGCGACCATCCTCAAGCTGTTTACCAGCAAAGATGAGTCTCTGTTGGTCCGGA 131281 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508 || |||||||| || || |||||||| ||||| ||||| || ||||| || || | || Sbjct 131282 GGGATTCCTTCCTTGTCTTGAATCTTAGCTTTAACATTGTCAACGGTGTC-AGAGCTCTC 131340 Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| ||||| || || ||||| || ||||| |||||||| ||||| Sbjct 131341 AACTTCTAGGGTAATGGTTTTGCCAGTGAGGGTTTTCACAAATATTTGCAT 131391 Score = 129 bits (142), Expect = 1e-24 Identities = 159/216 (74%), Gaps = 6/216 (3%) Strand=Plus/Plus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || || || | ||| || || ||||| || || || || | ||||| | || || Sbjct 131407 AAGGACAAGGTGAAGTGTTGACTCCTTCTGGATGTTGTAATCCGCAAGAGTCCGGCCATC 131466 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || || || || |||||||| || |||||||| || || ||||| |||||||||||||| Sbjct 131467 CTCGAGCTGCTTACCAGCAAAGATGAGCCTCTGCTGGTCCGGAGGGATTCCTTCTTTATC 131526 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATC---GCTAGGTTCTACCTCTAGTGTAAT 104523 || |||||||| || || || || | || || ||| ||| ||||| || ||||| Sbjct 131527 TTGGATCTTTGCCTTGACGTTATCAATAGTGTCAGAGCT---TTCAACCTCAAGAGTAAT 131583 Query 104524 AGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| || ||||| || || ||||| || ||||| Sbjct 131584 GGTCTTCCCTGTAAGAGTCTTAACAAAGATTTGCAT 131619 Score = 125 bits (138), Expect = 2e-23 Identities = 161/221 (73%), Gaps = 6/221 (3%) Strand=Plus/Plus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 || || || || ||||| | || || || |||||||| || || |||| || || | | Sbjct 130946 AGTCTCAGCACAAGATGGAGGGTTGACTCCTTCTGAATGTTGTAATCAGCAAGTGTGCGA 131005 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 || ||||| || || || || || || || || |||||||| || || | || ||||| Sbjct 131006 CCATCTTCGAGCTGCTTGCCGGCGAATATGAGTCTCTGTTGGTCTGGTGAGATCCCTTCC 131065 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATC---GCTAGGTTCTACCTCTAGT 104518 || || || ||||| || |||||||| || |||||||| ||| ||| ||||| | Sbjct 131066 TTGTCTTGGATCTTGGCCTTTACATTGTCAACGGTATCTGAGCT---TTCAACCTCCAAA 131122 Query 104519 GTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || ||||| ||||| || || || ||||||||||| Sbjct 131123 GTTATGGTTTTACCGGTAAGGGTCTTGACGAATATCTGCAT 131163 Score = 120 bits (132), Expect = 7e-22 Identities = 147/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || ||||| || || || ||||| | ||||| | ||| || || || || || ||| Sbjct 130511 GTCGACTCTTTTTGGATGTTGTAGTCTGCAAGAGTACGACCATCCTCAAGCTGCTTACCA 130570 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || || |||||||| || || || || |||||||| || ||||||||||| || Sbjct 130571 GCAAAGATGAGTCTCTGTTGGTCTGGTGGGATCCCTTCTTTGTCTTGAATCTTTGCCTTC 130630 Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 ||||| ||||| || || || | || ||||| | || || || || || || || || Sbjct 130631 ACATTATCTACAGTGTC-TGAGCTCTCAACCTCCAAAGTTATGGTTTTTCCGGTTAGGGT 130689 Query 104542 TTTTACAAATATCTGCAT 104559 || ||||| |||||||| Sbjct 130690 CTTGACAAAAATCTGCAT 130707 >seq144 Length=115930 Score = 136 bits (150), Expect = 9e-27 Identities = 240/342 (70%), Gaps = 6/342 (2%) Strand=Plus/Plus Query 268945 TTTTTACGGATTCCAGATAGCTATAGAAAATATTCATTCAGAGATGTACAGTCTATTAAT 269004 ||| |||||||||||||| || || || ||||||||||| |||||||| ||||| | | Sbjct 55759 TTTCTACGGATTCCAGATCGCGATTGAGAATATTCATTCCGAGATGTATAGTCTCCTTCT 55818 Query 269005 AGATACTTATATAGATGATAACAACGAAAAGAAAAGA-CTATTTTCTTCTATGAGAACTA 269063 ||||| || || | |||||||| || | || | | || || | || ||| | Sbjct 55819 CGATACGTACATCAAAGATAACAAAGAGA-GAGATCATCTCTTCCGCGCGATTGAAACCA 55877 Query 269064 TGGACTGTGTGAGaaaaaaaTCTGAATGGGCTCTGAAATGGATAAACG-ATAGCGCGCCT 269122 | || || || ||| | | ||||| ||| ||||| ||| || | ||| Sbjct 55878 TTCCTTGCGTCGCGAAGAAAGCACAGTGGGCGATGACTTGGATCGACGGATCTCAAACCT 55937 Query 269123 TACGGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGT-CTTT 269181 | || ||| | | || ||||| || || |||||||| ||||| || || ||| Sbjct 55938 T-CGCTGAACGAATCGTAGCTTTCGCTTGCGTTGAAGGTATCTTCTTCTCCGGTAGCTTC 55996 Query 269182 TGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGA 269241 ||| | ||||| ||| | |||||| |||| || ||||| || ||||| ||||||||||| Sbjct 55997 TGCTCC-ATCTTCTGGCTTAAGAAACGAGGACTCATGCCTGGTTTAACCTTCTCTAACGA 56055 Query 269242 ATTGATAAGCAGGGACGAAGGTTTACACTGCGACTTCGCTTG 269283 |||||| | |||||||| ||||||||||| |||||||| Sbjct 56056 ATTGATCTCTCGAGACGAAGGCTTACACTGCGATTTCGCTTG 56097 >seq3586 Length=17470 Score = 131 bits (144), Expect = 4e-25 Identities = 169/231 (73%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||||| | || || | || | || ||||||||||| || || || || Sbjct 5538 ATACCACCTCTTAATCGGAGAACCAAGTGGAGGGTTGATTCTTTCTGGATGTTGTAATCG 5479 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | | || | || |||||||| |||||||| || || || | ||| || ||||| ||| Sbjct 5478 GCCAAGGTACGGCCATCTTCTAGCTGTTTTCCGGCGAAGATCAACCTTTGCTGATCCGGA 5419 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508 || || ||||| ||||||||||||||||| || ||||| || | |||||| || | || Sbjct 5418 GGAATGCCTTCCTTATCCTGAATCTTTGCCTTAACATTGTCGATGGTATC-AGAGCTCTC 5360 Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || || || ||||| ||||| |||||||| || || | ||||| Sbjct 5359 GACATCGAGAGTGATGGTCTTGCCAGTGAGTGTTTTCACGAAAACTTGCAT 5309 Score = 116 bits (128), Expect = 9e-21 Identities = 166/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||| || | ||| || || || | || || || ||||| || || |||||| Sbjct 5994 ATACCACCTCTGAGACGAAGGACAAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCA 5935 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | || || | ||| || || || || || ||||| || || || || || || || ||| Sbjct 5934 GCGAGTGTGCGACCATCCTCAAGCTGCTTACCAGCGAAGATGAGTCTTTGCTGGTCCGGA 5875 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508 || |||||||| || ||||||||||| || || ||||| || | || || || | || Sbjct 5874 GGGATTCCTTCCTTGTCCTGAATCTTAGCCTTGACATTATCGATAGTGTC-TGAGCTCTC 5816 Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| | ||||| || || || || || || || ||||| |||||||| Sbjct 5815 GACCTCCAACGTAATGGTTTTGCCGGTGAGGGTCTTAACAAAGATCTGCAT 5765 Score = 116 bits (128), Expect = 9e-21 Identities = 146/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || || |||| | ||| | ||| || || || ||||||||| Sbjct 6417 GTCGACTCCTTCTGGATGTTGTAATCAGCCAAAGTCCGACCATCCTCGAGCTGTTTTCCA 6358 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || || |||||||| || ||||| || ||||| || ||||||||||| || || Sbjct 6357 GCGAAGATGAGTCTCTGTTGGTCCGGAGGGATCCCTTCCTTGTCCTGAATCTTAGCCTTA 6298 Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 ||||| || | || || || | || ||||| | ||||||||||| || || | || Sbjct 6297 ACATTATCAATTGTGTC-TGAGCTCTCAACCTCCAAGGTAATAGTCTTGCCTGTCAAAGT 6239 Query 104542 TTTTACAAATATCTGCAT 104559 || ||||| || ||||| Sbjct 6238 CTTCACAAAGATTTGCAT 6221 >seq516 Length=37039 Score = 129 bits (142), Expect = 1e-24 Identities = 158/213 (74%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || || || | ||| ||||| || || || || ||||| | ||||| | ||| || Sbjct 10005 AGCACAAGGTGAAGTGTTGATTCCTTTTGGATGTTGTAGTCTGCAAGAGTACGACCATCC 10064 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || || || || |||||||| || || || ||||| || || || || |||||||| || Sbjct 10065 TCAAGCTGCTTACCAGCAAAGATGAGTCTTTGTTGGTCTGGTGGGATCCCTTCTTTGTCT 10124 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGT 104526 ||||||||||| |||||||| |||| || || || | || ||||| | || || || Sbjct 10125 TGAATCTTTGCCTTTACATTATCTATTGTGTC-TGAGCTCTCAACCTCCAAAGTTATGGT 10183 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| || ||||| ||||| |||||||| Sbjct 10184 TTTGCCAGTTAGGGTTTTCACAAAAATCTGCAT 10216 Score = 120 bits (132), Expect = 7e-22 Identities = 157/216 (73%), Gaps = 6/216 (3%) Strand=Plus/Plus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || || || | ||| || || |||||||| || || |||| ||||| | ||| || Sbjct 10232 AAGGACAAGGTGAAGTGTTGACTCCTTCTGAATGTTGTAATCAGCAAGAGTGCGACCATC 10291 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 ||| || || || || || || || || || ||||| || || || || ||||| || || Sbjct 10292 TTCGAGCTGCTTGCCGGCGAATATGAGTCTTTGTTGGTCTGGTGGGATCCCTTCCTTGTC 10351 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATC---GCTAGGTTCTACCTCTAGTGTAAT 104523 || ||||| || || ||||| || | |||||| ||| ||| ||||| | || || Sbjct 10352 TTGGATCTTGGCCTTCACATTGTCAATGGTATCTGAGCT---TTCAACCTCCAAAGTTAT 10408 Query 104524 AGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| ||||| || || || ||||||||||| Sbjct 10409 GGTTTTACCGGTAAGGGTCTTGACGAATATCTGCAT 10444 Score = 116 bits (128), Expect = 9e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || ||||| | || || ||||| || || || || || | || | | | ||| ||| Sbjct 9777 AGAACAAGATGAAGAGTCGACTCTTTTTGGATGTTGTAATCCGCTAAAATGCGACCATCT 9836 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 ||||| || || || ||||| || |||||||| || || || | || |||||||| || Sbjct 9837 TCTAGCTGCTTCCCCGCAAAGATAAGCCTCTGCTGGTCCGGTTGGATCCCTTCTTTGTCA 9896 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 ||||||||||| || ||||| || || ||||| | || ||||| || | || ||| Sbjct 9897 TGAATCTTTGCCTTGACATTGTCAACCGTATCAGAACTCTCGACCTCAAGAATGATGGTC 9956 Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || | || || ||||| |||||||| Sbjct 9957 TTGCCCGTCAAAGTCTTGACAAAAATCTGCAT 9988 >seq1 Length=111110 Score = 127 bits (140), Expect = 5e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392 || ||||| || | || || | ||| | || || |||||||| || || || || | Sbjct 60647 CCTCCTCTCAGACGGAGCACCAAATGAAGCGTCGACTCTTTCTGGATGTTGTAATCGGCG 60588 Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452 || || || |||||||| ||||| || || || || || || | ||| ||||| || || Sbjct 60587 AGTGTCCTTCCGTCTTCCAGTTGCTTCCCGGCGAAGATCAGACGCTGCTGATCCGGTGGG 60528 Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512 |||||||| || || || ||||| || || ||||| || | || || | ||| ||| Sbjct 60527 ATTCCTTCCTTGTCTTGGATCTTCGCCTTCACATTGTCGATTGTGTCCGATGATTCAACC 60468 Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562 ||||| || || ||||| || || || ||||| || || ||||||||||| Sbjct 60467 TCTAGGGTTATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATTTT 60418 >seq1061 Length=128926 Score = 125 bits (138), Expect = 2e-23 Identities = 111/139 (80%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 104331 TTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAG 104390 |||| ||||| ||||| || || ||||| | ||||| |||||||| || || || |||| Sbjct 82977 TTCCACCTCTAAGCCTCAGGACAAGATGAAGAGTAGACTCTTTCTGGATGTTGTAATCAG 83036 Query 104391 ATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAG 104450 |||||||| || || || ||||| || |||||||| || ||||| ||||||||||| | Sbjct 83037 CTAGAGTTCGGCCATCCTCAAGTTGCTTACCAGCAAATATCAGCCTTTGTTGATCAGGTG 83096 Query 104451 GTATTCCTTCTTTATCCTG 104469 |||| || ||||| ||||| Sbjct 83097 GTATACCCTCTTTGTCCTG 83115 >seq683 Length=32930 Score = 120 bits (132), Expect = 7e-22 Identities = 112/141 (79%), Gaps = 1/141 (1%) Strand=Plus/Minus Query 104329 TATTCCC-CCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGT 104387 || |||| ||||| ||||| | || | || | |||||| ||||||||||| || || | Sbjct 24646 TAGTCCCACCTCTAAGCCTCAAAACCAAGTGAATTGTAGACTCTTTCTGAATGTTGTAAT 24587 Query 104388 CAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAG 104447 ||| || ||||| ||| ||||||| |||||| |||||||| || | |||||||||||| | Sbjct 24586 CAGCTAAAGTTCGACCATCTTCTAATTGTTTACCAGCAAATATCAACCTCTGTTGATCTG 24527 Query 104448 GAGGTATTCCTTCTTTATCCT 104468 | ||||| || ||||| |||| Sbjct 24526 GTGGTATCCCCTCTTTGTCCT 24506 >seq275 Length=143682 Score = 107 bits (118), Expect = 4e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||||||||| || || | | || | ||| || || || || ||||| Sbjct 123414 GTTGACTCCTTCTGAATATTGTAATCGGCCAAGGTACGACCATCCTCAAGCTGCTTTCCG 123355 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || | |||||| || || || || || || ||||| || || ||||| ||||| Sbjct 123354 GCGAAGATCAACCTCTGCTGGTCCGGTGGGATACCCTCTTTGTCTTGGATCTTGGCTTTC 123295 Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 || || || | ||| ||| || | || ||||| || ||||| ||||||||||| | || Sbjct 123294 ACGTTGTCAATGGTGTCGG-AGCTCTCCACCTCGAGGGTAATGGTCTTACCAGTCAAGGT 123236 Query 104542 TTTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 123235 CTTGACGAAGATCTGCAT 123218 Score = 98.7 bits (108), Expect = 2e-15 Identities = 156/220 (71%), Gaps = 3/220 (1%) Strand=Plus/Minus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 ||||| || || | || | || || || || || || || ||||||| | || | | Sbjct 123892 AGCCTGAGGACCAAGTGCAGAGTCGACTCCTTTTGGATGTTGTAGTCAGCCAATGTGCGA 123833 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 || || || || ||||||||||| || || || | ||| || || ||||| || ||||| Sbjct 123832 CCATCCTCAAGCTGTTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATACCTTCC 123773 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGT 104520 || ||||| ||||| || || || || || | ||| || || | || ||||| || || Sbjct 123772 TTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTC-AGAGCTCTCAACCTCAAGGGT 123714 Query 104521 AATAGTCTTACCAGT-AAGTGTTTTTACAAATATCTGCAT 104559 || ||||| || || ||| || || || || |||||||| Sbjct 123713 GATGGTCTTTCCGGTCAAGAGTCTTCACGAAGATCTGCAT 123674 Score = 98.7 bits (108), Expect = 2e-15 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| ||||| || || | | || | ||| || || || || ||||| Sbjct 139752 GTTGACTCCTTCTGGATATTGTAATCGGCCAAGGTACGACCATCCTCAAGCTGCTTTCCG 139693 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || | |||||| || || || || || || ||||| || || ||||| ||||| Sbjct 139692 GCGAAGATCAACCTCTGCTGGTCCGGTGGGATACCCTCTTTGTCTTGGATCTTGGCTTTC 139633 Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 || || || | ||| || || | || ||||| || ||||| ||||||||||| | || Sbjct 139632 ACGTTGTCAATGGTGTCAG-AGCTCTCCACCTCGAGGGTAATGGTCTTACCAGTCAAGGT 139574 Query 104542 TTTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 139573 CTTGACGAAGATCTGCAT 139556 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151283184599480