Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Barbarea_20vulgaris_20[genbank_20GCA_5F001920985.1_202016-12-23] 7,810 sequences; 167,352,128 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq3586 140 3e-28 seq275 136 4e-27 seq308 129 5e-25 seq516 120 3e-22 seq2666 113 4e-20 seq863 100 3e-16 >seq3586 Length=17470 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || ||||| ||||| | |||||||| | || ||||| || || | ||| |||||| | Sbjct 5535 CCACCTCTTAATCGGAGAACCAAGTGGAGGGTTGATTCTTTCTGGATGTTGTAATCGGCC 5476 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | || | ||| || |||||||||||| | ||||| || ||||||||||| |||||| Sbjct 5475 AAGGTACGGCCATCTTCTAGCTGTTTTCCGGCGAAGATCAACCTTTGCTGATCCGGAGGA 5416 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || ||||| || || | ||| |||||||| || | ||| || |||| | ||||| Sbjct 5415 ATGCCTTCCTTATCCTGAATCTTTGCCTTAACATTGTCGATGGTATCAGAGCTCTCGACA 5356 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | |||||||| || ||||| || |||||||| || | ||||| Sbjct 5355 TCGAGAGTGATGGTCTTGCCAGTGAGTGTTTTCACGAAAACTTGCAT 5309 Score = 136 bits (150), Expect = 4e-27 Identities = 170/230 (74%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATC-GCT 94839 || ||||||| || | ||||| || | ||| || |||||||| | ||| || || || Sbjct 5763 CCACCTCTCAGACGAAGAACCAAATGAAGAGTGGACTCCTTTTGGATGTTGTAGTCAGCG 5704 Query 94840 CATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGA 94897 ||||| || |||||| ||||| || ||| ||||||| | ||| |||||||| ||| Sbjct 5703 ---AGTGTGCGACCATCCTCAAGCTGCTTACCGGCAAAGATAAGTCTCTGCTGATCCGGA 5647 Query 94898 GGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCG 94957 || |||||||| ||||| | || || |||||||| | | |||||||| | ||| Sbjct 5646 GGGATACCTTCCTTGTCCTGGATCTTAGCCTTGACATTATCAATAGTGTCAGAGCTCTCG 5587 Query 94958 ACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || | ||||||||||| || || || || || |||||||||||||| Sbjct 5586 ACCTCCAAAGTGATGGTTTTGCCGGTGAGGGTCTTGACAAAGATCTGCAT 5537 Score = 114 bits (126), Expect = 1e-20 Identities = 120/158 (76%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 |||||| ||||| || || | ||||| | ||||||||| || ||||| || ||||| || Sbjct 5920 ATCCTCAAGCTGCTTACCAGCGAAGATGAGTCTTTGCTGGTCCGGAGGGATTCCTTCCTT 5861 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 ||| | ||| || |||||||| ||| |||||| | | ||||| || | ||| || Sbjct 5860 GTCCTGAATCTTAGCCTTGACATTATCGATAGTGTCTGAGCTCTCGACCTCCAACGTAAT 5801 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 |||||| || || || || || |||||||||||||||| Sbjct 5800 GGTTTTGCCGGTGAGGGTCTTAACAAAGATCTGCATGC 5763 Score = 107 bits (118), Expect = 2e-18 Identities = 155/217 (71%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA- 94851 |||||||| | ||| | || |||||||| || | ||| || || || |||| || Sbjct 6207 CGCAACACAAGGTGAAGGGTTGATTCCTTCTGGATGTTGTAGTCAGCCA--GTGTGCGAC 6150 Query 94852 -ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTT 94910 |||||| |||||||| || | ||||| | || ||||| || || || || || |||| Sbjct 6149 CATCCTCAAGCTGTTTCCCAGCGAAGATAAGCCTCTGCTGGTCCGGTGGGATTCCCTCTT 6090 Query 94911 TGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGA 94970 | || | || || |||||||| | ||| ||||| | | || || || | || | Sbjct 6089 TATCTTGGATCTTAGCCTTGACATTGTCGATTGTGTCTGAGCTCTCAACCTCGAGGGTAA 6030 Query 94971 TGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||||| || || |||||||| |||||||||||||| Sbjct 6029 TGGTTTTCCCTGTTAGAGTTTTGACAAAGATCTGCAT 5993 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||||||||| || || ||||| || | ||| ||||| || ||| |||||| Sbjct 6429 ACCAAGTGCAGGGTCGACTCCTTCTGGATGTTGTAATCAGCCAAAGTCCGACCATCCTCG 6370 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 ||||||||||| | ||||| | ||| || || || ||||| || ||||| ||||| | | Sbjct 6369 AGCTGTTTTCCAGCGAAGATGAGTCTCTGTTGGTCCGGAGGGATCCCTTCCTTGTCCTGA 6310 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || || ||||| || | | ||||| | | || || || | || || || || Sbjct 6309 ATCTTAGCCTTAACATTATCAATTGTGTCTGAGCTCTCAACCTCCAAGGTAATAGTCTTG 6250 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || | ||| ||||||||||| ||||| Sbjct 6249 CCTGTCAAAGTCTTCACAAAGATTTGCAT 6221 >seq275 Length=143682 Score = 136 bits (150), Expect = 4e-27 Identities = 157/210 (75%), Gaps = 1/210 (0%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||||||||| ||| || |||||||| | ||| || || || ||| |||||| Sbjct 123883 ACCAAGTGCAGAGTCGACTCCTTTTGGATGTTGTAGTCAGCCAATGTGCGACCATCCTCA 123824 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 ||||||||||| | ||||| | | ||||| || ||||| |||||||| ||||| | Sbjct 123823 AGCTGTTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATACCTTCCTTGTCCTGG 123764 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || || ||||||||| | ||| ||||||| | || || |||| |||||||| ||| Sbjct 123763 ATCTTGGCCTTGACGTTGTCGATGGTGTCAGAGCTCTCAACCTCAAGGGTGATGGTCTTT 123704 Query 94979 CCAGT-AAGAGTTTTCACAAAGATCTGCAT 95007 || || |||||| ||||| ||||||||||| Sbjct 123703 CCGGTCAAGAGTCTTCACGAAGATCTGCAT 123674 Score = 122 bits (134), Expect = 8e-23 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 ||||||||||| || | || || |||||||| | ||| |||||| || ||| | Sbjct 123660 CGCAACACCAAATGAAGGGTTGACTCCTTTTGAATGTTGTAATCGGCCAAGGTGCGACCA 123601 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||| ||||| ||||| | ||||| | | ||||| || |||||||||||||| || Sbjct 123600 TCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGAATACCTTCCTTA 123541 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | || || || |||||| | | | |||||||| | ||||| |||| ||||| Sbjct 123540 TCCTGGATCTTGGCTTTGACGTTGTCAATAGTGTCAGAGCTCTCGACTTCAAGGGTGATT 123481 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || ||||| ||||| || || ||||| Sbjct 123480 GTCTTCCCGGTGAGAGTCTTCACGAATATTTGCAT 123446 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||||||| | || |||||||| || | || || || || ||| | |||||| Sbjct 139080 ACCAAGTGGAGGGTGGATTCCTTCTGGATATTGTAGTCAGCCAAAGTACGGCCGTCCTCC 139021 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 | ||| |||||| | ||||| | || |||||||| |||||||||||||| || || | Sbjct 139020 AACTGCTTTCCGGCGAAGATAAGCCTCTGCTGATCCGGAGGAATACCTTCCTTATCCTGG 138961 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || || ||||| ||| | ||| ||||||| | || || || | |||||||| ||| Sbjct 138960 ATCTTGGCCTTAACGTTGTCGATGGTGTCAGAGCTTTCCACCTCGAGGGTGATGGTCTTT 138901 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || ||||| || || ||||||||||| Sbjct 138900 CCGGTGAGAGTCTTAACGAAGATCTGCAT 138872 Score = 104 bits (114), Expect = 2e-17 Identities = 116/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||| || || |||||| | ||||| ||||||||||| || || || ||||| || || Sbjct 139254 TCCTCGAGTTGCTTTCCGGCGAAGATCAATCTTTGCTGGTCCGGTGGGATACCCTCCTTA 139195 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | || || ||||||||| | ||| ||||||| | || || |||| ||||| Sbjct 139194 TCTTGGATCTTAGCCTTGACGTTGTCGATGGTGTCAGAGCTCTCCACCTCAAGAGTGATA 139135 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || ||||| || || ||||| || ||||| ||||| Sbjct 139134 GTCTTTCCGGTTAGGGTTTTGACGAAGATTTGCAT 139100 Score = 98.7 bits (108), Expect = 9e-16 Identities = 154/217 (71%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA- 94851 ||||| |||||||| | || || ||||| || | || |||||| || || || || Sbjct 123432 CGCAAGACCAAGTGAAGGGTTGACTCCTTCTGAATATTGTAATCGGCCA-AG-GTACGAC 123375 Query 94852 -ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTT 94910 |||||| ||||| |||||| | ||||| || || ||||| || || || ||||| |||| Sbjct 123374 CATCCTCAAGCTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGTGGGATACCCTCTT 123315 Query 94911 TGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGA 94970 |||| | || || || || ||| | | | ||||| | | || || || | || | Sbjct 123314 TGTCTTGGATCTTGGCTTTCACGTTGTCAATGGTGTCGGAGCTCTCCACCTCGAGGGTAA 123255 Query 94971 TGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||| || ||||| | || || || ||||||||||| Sbjct 123254 TGGTCTTACCAGTCAAGGTCTTGACGAAGATCTGCAT 123218 Score = 98.7 bits (108), Expect = 9e-16 Identities = 172/247 (70%), Gaps = 4/247 (2%) Strand=Plus/Minus Query 94763 TTTTTAAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTT 94822 |||| || ||| || ||||| | | ||||| ||||| || | || || ||||| Sbjct 139800 TTTTCNAAGATTTGCATACCTCCACGAAGACGCAAGACCAAATGAAGGGTTGACTCCTTC 139741 Query 94823 TGCACGTTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTA 94880 || | || |||||| || || || || |||||| ||||| |||||| | ||||| | Sbjct 139740 TGGATATTGTAATCGGCCA-AG-GTACGACCATCCTCAAGCTGCTTTCCGGCGAAGATCA 139683 Query 94881 ATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGA 94940 | || ||||| || || || ||||| |||||||| | || || || || ||| | | | Sbjct 139682 ACCTCTGCTGGTCCGGTGGGATACCCTCTTTGTCTTGGATCTTGGCTTTCACGTTGTCAA 139623 Query 94941 CAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGA 95000 ||||||| | || || || | || ||||| || ||||| | || || || |||| Sbjct 139622 TGGTGTCAGAGCTCTCCACCTCGAGGGTAATGGTCTTACCAGTCAAGGTCTTGACGAAGA 139563 Query 95001 TCTGCAT 95007 ||||||| Sbjct 139562 TCTGCAT 139556 >seq308 Length=205501 Score = 129 bits (142), Expect = 5e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 |||||||||| || | |||||| || | || ||||| || || | ||| |||||| Sbjct 131165 CCTCCTCTCAGACGAAGCACCAAATGAAGGGTTGATTCTTTCTGGATGTTGTAATCGGCA 131224 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | |||| |||||| |||||||| || ||||||| | ||| || || || ||||| Sbjct 131225 AGAGTGCGACCATCCTCAAGCTGTTTACCAGCAAAGATGAGTCTCTGTTGGTCCGGAGGG 131284 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || ||||| ||||| | ||| || || || || | | || ||||||| | || || Sbjct 131285 ATTCCTTCCTTGTCTTGAATCTTAGCTTTAACATTGTCAACGGTGTCAGAGCTCTCAACT 131344 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || | || |||||||| ||||| || ||||||||||| || ||||||| Sbjct 131345 TCTAGGGTAATGGTTTTGCCAGTGAGGGTTTTCACAAATATTTGCATGC 131393 Score = 120 bits (132), Expect = 3e-22 Identities = 174/242 (72%), Gaps = 4/242 (2%) Strand=Plus/Plus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| | | || || ||||| | || | |||||||||| || || ||||| || | Sbjct 130696 AAAAATCTGCATGCCACCTCTTAGACGAAGGACCAAGTGCAGGGTTGACTCCTTCTGGAT 130755 Query 94828 GTTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTT 94885 ||| ||||| || || ||| || |||||| |||||||| || | ||||| | ||| Sbjct 130756 GTTGTAATCAG-CA-AGAGTTCGACCATCCTCAAGCTGTTTACCAGCGAAGATGAGTCTC 130813 Query 94886 TGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTG 94945 || || || ||||| || ||||| ||||| | ||||||| ||| || | |||| ||| Sbjct 130814 TGTTGGTCCGGAGGGATCCCTTCCTTGTCTTGGATTTTTGTCTTCACATTGTCGACTGTG 130873 Query 94946 TCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGC 95005 || | | || || || | || ||||||||||| ||||| || || ||||| |||||| Sbjct 130874 TCCGAGCTCTCCACTTCCAAAGTTATGGTTTTTCCGGTAAGGGTCTTAACAAAAATCTGC 130933 Query 95006 AT 95007 || Sbjct 130934 AT 130935 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870 || || ||||| || | ||| ||||| | ||| | |||||| ||||| || || Sbjct 131423 GTTGACTCCTTCTGGATGTTGTAATCCGCAAGAGTCCGGCCATCCTCGAGCTGCTTACCA 131482 Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930 ||||||| | || ||||| || ||||| || |||||||| || | || ||||||||| Sbjct 131483 GCAAAGATGAGCCTCTGCTGGTCCGGAGGGATTCCTTCTTTATCTTGGATCTTTGCCTTG 131542 Query 94931 ACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTT 94990 ||| | | |||||||| | || || |||| || ||||| || || |||||||| Sbjct 131543 ACGTTATCAATAGTGTCAGAGCTTTCAACCTCAAGAGTAATGGTCTTCCCTGTAAGAGTC 131602 Query 94991 TTCACAAAGATCTGCAT 95007 || |||||||| ||||| Sbjct 131603 TTAACAAAGATTTGCAT 131619 Score = 105 bits (116), Expect = 6e-18 Identities = 118/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 |||||| ||||| || || ||||||| | ||| || || ||||| || || |||||||| Sbjct 130552 ATCCTCAAGCTGCTTACCAGCAAAGATGAGTCTCTGTTGGTCTGGTGGGATCCCTTCTTT 130611 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 ||| | ||| |||||||| || | |||||||| | | || || || | || || Sbjct 130612 GTCTTGAATCTTTGCCTTCACATTATCTACAGTGTCTGAGCTCTCAACCTCCAAAGTTAT 130671 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 ||||||||| || || || || ||||| |||||||||| Sbjct 130672 GGTTTTTCCGGTTAGGGTCTTGACAAAAATCTGCATGC 130709 >seq516 Length=37039 Score = 120 bits (132), Expect = 3e-22 Identities = 160/219 (73%), Gaps = 4/219 (2%) Strand=Plus/Plus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA- 94851 |||| ||| | ||| | || ||||||||||| | ||| || || || || || || Sbjct 10002 CGCAGCACAAGGTGAAGTGTTGATTCCTTTTGGATGTTGTAGTCTG-CA-AGAGTACGAC 10059 Query 94852 -ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTT 94910 |||||| ||||| || || ||||||| | |||||| || ||||| || || ||||||| Sbjct 10060 CATCCTCAAGCTGCTTACCAGCAAAGATGAGTCTTTGTTGGTCTGGTGGGATCCCTTCTT 10119 Query 94911 TGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGA 94970 |||| | ||| |||||||| || | | ||||| | | || || || | || | Sbjct 10120 TGTCTTGAATCTTTGCCTTTACATTATCTATTGTGTCTGAGCTCTCAACCTCCAAAGTTA 10179 Query 94971 TGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 ||||||| ||||| || ||||||||||| |||||||||| Sbjct 10180 TGGTTTTGCCAGTTAGGGTTTTCACAAAAATCTGCATGC 10218 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/209 (71%), Gaps = 3/209 (1%) Strand=Plus/Plus Query 94801 CAAG-TGCAAAGTAGATTCCTTTTGCACGTTATAATC-GCTCATAGTGTTGGAATCCTCC 94858 |||| || | ||| || || ||||| | ||| ||||| ||| | | || ||| || Sbjct 9781 CAAGATGAAGAGTCGACTCTTTTTGGATGTTGTAATCCGCTAAAA-TGCGACCATCTTCT 9839 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 ||||| || || ||||||| | || ||||| || || | || ||||||||||||| | Sbjct 9840 AGCTGCTTCCCCGCAAAGATAAGCCTCTGCTGGTCCGGTTGGATCCCTTCTTTGTCATGA 9899 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || ||||||||||| | | || || |||| ||||| |||| ||||||| || Sbjct 9900 ATCTTTGCCTTGACATTGTCAACCGTATCAGAACTCTCGACCTCAAGAATGATGGTCTTG 9959 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || | ||| || ||||| |||||||| Sbjct 9960 CCCGTCAAAGTCTTGACAAAAATCTGCAT 9988 Score = 86.0 bits (94), Expect = 6e-12 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || |||||||| | | ||||||| | ||| || ||| ||| | || ||||| | Sbjct 10446 CCACCTCTCAACCTTAGAGCCAAGTGGAGAGTTGACTCCAATTGGATATTGTAATCAGCC 10505 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 || || | |||||| || |||| ||| |||||| | ||||||||| ||| ||||| Sbjct 10506 ATGGTAAGGCCATCCTCGAGAAGTTTGCCGGAAAAGATGAGTCTTTGCTGGTCTAGAGGA 10565 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGAC 94932 || ||||||||| | | || ||||||||||| Sbjct 10566 ATCCCTTCTTTGGCCTCGATCTTTGCCTTGAC 10597 >seq2666 Length=20083 Score = 113 bits (124), Expect = 4e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 ||| | ||| | || ||||||||||| | |||||| || | ||||| ||| || Sbjct 9299 CACAAGGTGAAGTGTTGATTCCTTTTGGATGTTATAGTCTGCAAGAGTGTGACCATCTTC 9358 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 || || || || | ||||| | ||| || || |||| | || ||||||||||| | Sbjct 9359 AAGTTGCTTGCCAGCGAAGATAAGTCTCTGTTGGTCTGCTTGGATCCCTTCTTTGTCGTG 9418 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 ||| || |||||||| | | || ||||||| | || || || | || |||||||| Sbjct 9419 AATCTTGGCCTTGACATTGTCAACGGTGTCAGAGCTCTCAACTTCTAGGGTTATGGTTTT 9478 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 ||||| || ||||||||||| |||||||||| Sbjct 9479 GCCAGTTAGGGTTTTCACAAAAATCTGCATGC 9510 >seq863 Length=117140 Score = 100 bits (110), Expect = 3e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 ||||| || | || |||||||| || | ||| || ||| | ||| | || || Sbjct 77652 CACCAGATGAAGCGTCGATTCCTTCTGGATGTTGTAGTCGGCGAGAGTACGGCCGTCTTC 77711 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 |||||||| ||| | || || |||| ||||| || || || || || || ||||| | Sbjct 77712 GAGCTGTTTCCCGGCGAAAATCAATCGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCTTG 77771 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 || || || ||||| | ||| ||||||| | ||||| |||| |||||||| || Sbjct 77772 GATCTTCGCTTTGACATTGTCGATGGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTT 77831 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || |||||||| ||||||||||| Sbjct 77832 ACCCGTTAGGGTTTTCACGAAGATCTGCAT 77861 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448247435571600