Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Barbarea_20vulgaris_20[genbank_20GCA_5F001920985.1_202016-12-23] 7,810 sequences; 167,352,128 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq275 161 2e-34 seq3586 156 1e-32 seq308 145 2e-29 seq1 141 2e-28 seq516 132 1e-25 seq863 111 4e-19 seq2666 109 1e-18 seq511 96.9 8e-15 seq216 87.8 4e-12 >seq275 Length=143682 Score = 161 bits (178), Expect = 2e-34 Identities = 168/219 (77%), Gaps = 1/219 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || || ||||| | ||| ||||||||||||||||||| ||||||||||||||| || Sbjct 123895 CGGAGCCTGAGGACCAAGTGCAGAGTCGACTCCTTTTGGATGTTGTAGTCAGCCAATGTG 123836 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| || ||||| ||||| ||||||||||||||||||||||||||| || ||| Sbjct 123835 CGACCATCCTCAAGCTGTTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATACCT 123776 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| ||| ||| |||| |||||| | | || || || | Sbjct 123775 TCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAGCTCTCAACCTCAAGG 123716 Query 199589 GTGATCGTCTTACCCGT-GAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || || ||||| ||||| || || || Sbjct 123715 GTGATGGTCTTTCCGGTCAAGAGTCTTCACGAAGATCTG 123677 Score = 150 bits (166), Expect = 4e-31 Identities = 164/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| || || || | |||||| || || ||||| |||| ||||||||||||||||| Sbjct 139092 CGAAGCCTGAGAACCAAGTGGAGGGTGGATTCCTTCTGGATATTGTAGTCAGCCAAAGTA 139033 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || || |||| |||||||||||||||||| || | |||||| |||||| ||| ||| Sbjct 139032 CGGCCGTCCTCCAACTGCTTTCCGGCGAAGATAAGCCTCTGCTGATCCGGAGGAATACCT 138973 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| ||| ||| |||| |||||| | |||| || || | Sbjct 138972 TCCTTATCCTGGATCTTGGCCTTAACGTTGTCGATGGTGTCAGAGCTTTCCACCTCGAGG 138913 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || |||||||| || || || || || Sbjct 138912 GTGATGGTCTTTCCGGTGAGAGTCTTAACGAAGATCTG 138875 Score = 143 bits (158), Expect = 6e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | ||| || || |||||||| |||| |||||||||||| | || | ||||| Sbjct 124114 AGGACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCAGCAAGTGTGCGACCATCC 124055 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || ||||||||||| |||||||||||||||||||| |||||| || ||||| ||| Sbjct 124054 TCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCCGGAGGGATGCCTTCCTTGTCC 123995 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| || || | |||||||| | || || |||| ||||| ||| Sbjct 123994 TGGATCTTGGCCTTAACATTATCAATGGTGTCTGAGCTCTCCACCTCCAGTGTGATGGTC 123935 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || | ||| ||||| ||||| || Sbjct 123934 TTTCCGGTCAAAGTCTTCACGAAAATCTG 123906 Score = 141 bits (156), Expect = 2e-28 Identities = 162/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | || || || ||||||||||| | |||||| || ||||| || Sbjct 123666 CGAAGACGCAACACCAAATGAAGGGTTGACTCCTTTTGAATGTTGTAATCGGCCAAGGTG 123607 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| || ||||||||||| ||||||||||||||||||||||||||| ||| ||| Sbjct 123606 CGACCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGAATACCT 123547 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| || ||| || | ||||| | | || || || | Sbjct 123546 TCCTTATCCTGGATCTTGGCTTTGACGTTGTCAATAGTGTCAGAGCTCTCGACTTCAAGG 123487 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || |||||||| ||||| || ||||| Sbjct 123486 GTGATTGTCTTCCCGGTGAGAGTCTTCACGAATATTTG 123449 Score = 122 bits (134), Expect = 2e-22 Identities = 160/219 (73%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | || ||| | || || || |||||||| |||| |||||||||||||||||| Sbjct 139548 CGTAGACGCAAGACCAAATGAAGTGTAGACTCCTTCTGGATGTTGTAGTCAGCCAAAGTA 139489 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || || || || ||||||||||||||||| | | |||||||||||| ||||| Sbjct 139488 CGGCCGTCCTCAAGTTGCTTTCCGGCGAAGATCAATCTCTGCTGGTCCGGTGGGATTCCC 139429 Query 199529 TCTCGCTCCTGAATCTTTTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587 || || || || ||| || |||||| |||| |||||| | | || || ||||| Sbjct 139428 TCCTTGTCTTGGAT-TTTAGCTTTCACGTTGTCGATGGTGTCAGAACTCTCCACCTCCAA 139370 Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || || | || || || || ||||| Sbjct 139369 AGTGATAGTCTTTCCGGTCAAGGTCTTAACGAAGATTTG 139331 Score = 118 bits (130), Expect = 2e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| || || || || || || ||||||||||| || | |||||||||||| ||||| Sbjct 139320 CGAAGCCTGAGAACTAGATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCAGCTAAAGTA 139261 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || || || || ||||||||||||||||| | | ||||||||||| || || Sbjct 139260 CGGCCGTCCTCGAGTTGCTTTCCGGCGAAGATCAATCTTTGCTGGTCCGGTGGGATACCC 139201 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || || ||||| ||| ||| |||| |||||| | | || || || | Sbjct 139200 TCCTTATCTTGGATCTTAGCCTTGACGTTGTCGATGGTGTCAGAGCTCTCCACCTCAAGA 139141 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || || || ||||| || || ||||| Sbjct 139140 GTGATAGTCTTTCCGGTTAGGGTTTTGACGAAGATTTG 139103 Score = 100 bits (110), Expect = 7e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || ||| | ||| || || |||||||| || | ||||| || ||||| || Sbjct 123438 CGAAGACGCAAGACCAAGTGAAGGGTTGACTCCTTCTGAATATTGTAATCGGCCAAGGTA 123379 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| || |||||||||||||||||||| | | |||||||||||| || || Sbjct 123378 CGACCATCCTCAAGCTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGTGGGATACCC 123319 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 ||| || || ||||| |||||| || | |||||| | | || || || | Sbjct 123318 TCTTTGTCTTGGATCTTGGCTTTCACGTTGTCAATGGTGTCGGAGCTCTCCACCTCGAGG 123259 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || |||||||| || | || || || || || || Sbjct 123258 GTAATGGTCTTACCAGTCAAGGTCTTGACGAAGATCTG 123221 Score = 100 bits (110), Expect = 7e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || ||| | || || || |||||||| |||| ||||| || ||||| || Sbjct 139776 CGAAGACGCAAGACCAAATGAAGGGTTGACTCCTTCTGGATATTGTAATCGGCCAAGGTA 139717 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| || |||||||||||||||||||| | | |||||||||||| || || Sbjct 139716 CGACCATCCTCAAGCTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGTGGGATACCC 139657 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 ||| || || ||||| |||||| || | |||||| | | || || || | Sbjct 139656 TCTTTGTCTTGGATCTTGGCTTTCACGTTGTCAATGGTGTCAGAGCTCTCCACCTCGAGG 139597 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || |||||||| || | || || || || || || Sbjct 139596 GTAATGGTCTTACCAGTCAAGGTCTTGACGAAGATCTG 139559 Score = 86.0 bits (94), Expect = 1e-11 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 200938 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 200997 |||||||||||||||||| | || ||||| | || |||||||||||||| | ||||| Sbjct 123347 ATCTTCGCCGGAAAGCAGCTTGAGGATGGTCGTACCTTGGCCGATTACAATATTCAGAAG 123406 Query 200998 GAGTCTACTCTTCACCTTGTTTTGAGACTTCG 201029 ||||| || |||||| | || ||| | ||||| Sbjct 123407 GAGTCAACCCTTCACTTGGTCTTGCGTCTTCG 123438 Score = 86.0 bits (94), Expect = 1e-11 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 200935 CTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAG 200994 |||||||||||||||||||||||||| || || | |||||||| || ||||| ||||| Sbjct 138998 CTTATCTTCGCCGGAAAGCAGTTGGAGGACGGCCGTACTTTGGCTGACTACAATATCCAG 139057 Query 200995 AAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 201029 || || || || || ||| | ||| | || ||||| Sbjct 139058 AAGGAATCCACCCTCCACTTGGTTCTCAGGCTTCG 139092 Score = 86.0 bits (94), Expect = 1e-11 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 200938 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 200997 |||||||||||||||||| | || ||||| | || |||||||||||||| ||||||| Sbjct 139685 ATCTTCGCCGGAAAGCAGCTTGAGGATGGTCGTACCTTGGCCGATTACAATATCCAGAAG 139744 Query 200998 GAGTCTACTCTTCACCTTGTTTTGAGACTTCG 201029 ||||| || ||||| | || ||| | ||||| Sbjct 139745 GAGTCAACCCTTCATTTGGTCTTGCGTCTTCG 139776 >seq3586 Length=17470 Score = 156 bits (172), Expect = 1e-32 Identities = 160/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 |||||||||||||| ||||||||||| |||| |||||||||||| | || | ||||| Sbjct 5976 AGGACAAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCGAGTGTGCGACCATCC 5917 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || ||||||||||| | |||||||||||| |||||||| ||| Sbjct 5916 TCAAGCTGCTTACCAGCGAAGATGAGTCTTTGCTGGTCCGGAGGGATTCCTTCCTTGTCC 5857 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||| || |||| ||||||| | || || |||||||| || || Sbjct 5856 TGAATCTTAGCCTTGACATTATCGATAGTGTCTGAGCTCTCGACCTCCAACGTAATGGTT 5797 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || || ||||| || || Sbjct 5796 TTGCCGGTGAGGGTCTTAACAAAGATCTG 5768 Score = 150 bits (166), Expect = 4e-31 Identities = 164/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | ||| || ||||||||||| |||| |||||| |||||||||||| Sbjct 6441 CGAAGACGAAGAACCAAGTGCAGGGTCGACTCCTTCTGGATGTTGTAATCAGCCAAAGTC 6382 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| || ||||| ||||| ||||||||||| | ||| ||||||||| || ||| Sbjct 6381 CGACCATCCTCGAGCTGTTTTCCAGCGAAGATGAGTCTCTGTTGGTCCGGAGGGATCCCT 6322 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||||||||| ||| || || | ||||||| | || || ||||| Sbjct 6321 TCCTTGTCCTGAATCTTAGCCTTAACATTATCAATTGTGTCTGAGCTCTCAACCTCCAAG 6262 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || || | ||| |||||||| ||||| Sbjct 6261 GTAATAGTCTTGCCTGTCAAAGTCTTCACAAAGATTTG 6224 Score = 134 bits (148), Expect = 3e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | |||||| || || || || |||| |||||| || ||||| || | |||||| Sbjct 5520 AGAACCAAGTGGAGGGTTGATTCTTTCTGGATGTTGTAATCGGCCAAGGTACGGCCATCT 5461 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || ||||| |||||||||||||| | | ||||| |||||| ||| ||||| ||| Sbjct 5460 TCTAGCTGTTTTCCGGCGAAGATCAACCTTTGCTGATCCGGAGGAATGCCTTCCTTATCC 5401 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 ||||||||| ||| || |||| ||| || | | || ||||| | ||||| ||| Sbjct 5400 TGAATCTTTGCCTTAACATTGTCGATGGTATCAGAGCTCTCGACATCGAGAGTGATGGTC 5341 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| |||||||| |||| ||| Sbjct 5340 TTGCCAGTGAGTGTTTTCACGAAAACTTG 5312 Score = 118 bits (130), Expect = 2e-21 Identities = 146/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 || ||||| ||||||||||||| |||||||||||| | || | ||||| || |||||| Sbjct 5739 TGAAGAGTGGACTCCTTTTGGATGTTGTAGTCAGCGAGTGTGCGACCATCCTCAAGCTGC 5680 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546 || ||||| ||||| || | |||||| |||||| || ||||| ||||| ||||| Sbjct 5679 TTACCGGCAAAGATAAGTCTCTGCTGATCCGGAGGGATACCTTCCTTGTCCTGGATCTTA 5620 Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606 ||| || || | ||||| | | || || ||||| ||||| || || || ||| Sbjct 5619 GCCTTGACATTATCAATAGTGTCAGAGCTCTCGACCTCCAAAGTGATGGTTTTGCCGGTG 5560 Query 199607 AGAGTTTTCACAAAAATTTG 199626 || || || ||||| || || Sbjct 5559 AGGGTCTTGACAAAGATCTG 5540 Score = 118 bits (130), Expect = 2e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || |||||||| || || || ||||| |||| |||||||||||||| || Sbjct 6213 CGAAGACGCAACACAAGGTGAAGGGTTGATTCCTTCTGGATGTTGTAGTCAGCCAGTGTG 6154 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| || ||||| || || |||||||| || | |||||||||||| ||||| Sbjct 6153 CGACCATCCTCAAGCTGTTTCCCAGCGAAGATAAGCCTCTGCTGGTCCGGTGGGATTCCC 6094 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 ||| || || ||||| ||| || |||| ||||||| | || || || | Sbjct 6093 TCTTTATCTTGGATCTTAGCCTTGACATTGTCGATTGTGTCTGAGCTCTCAACCTCGAGG 6034 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || |||||||| ||||| || || Sbjct 6033 GTAATGGTTTTCCCTGTTAGAGTTTTGACAAAGATCTG 5996 Score = 84.2 bits (92), Expect = 5e-11 Identities = 67/81 (83%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 200938 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 200997 |||||||||||||| ||| | |||||||| | || ||||||||||||||| |||||||| Sbjct 5438 ATCTTCGCCGGAAAACAGCTAGAAGATGGCCGTACCTTGGCCGATTACAACATCCAGAAA 5497 Query 200998 GAGTCTACTCTTCACCTTGTT 201018 || || || || ||| | ||| Sbjct 5498 GAATCAACCCTCCACTTGGTT 5518 >seq308 Length=205501 Score = 145 bits (160), Expect = 2e-29 Identities = 163/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||||||||||| || || |||||||| |||| |||||| || || | |||| Sbjct 131399 CGAAGACGAAGGACAAGGTGAAGTGTTGACTCCTTCTGGATGTTGTAATCCGCAAGAGTC 131458 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| || |||||||| || || |||||||| | ||||||||||||| |||||| Sbjct 131459 CGGCCATCCTCGAGCTGCTTACCAGCAAAGATGAGCCTCTGCTGGTCCGGAGGGATTCCT 131518 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 ||| || || |||||| ||| ||| || | ||||| | |||| || || | Sbjct 131519 TCTTTATCTTGGATCTTTGCCTTGACGTTATCAATAGTGTCAGAGCTTTCAACCTCAAGA 131578 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || || ||||| || ||||| ||||| Sbjct 131579 GTAATGGTCTTCCCTGTAAGAGTCTTAACAAAGATTTG 131616 Score = 138 bits (152), Expect = 3e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || |||||||| ||||||||||| ||||||| ||||||||| || | ||| | ||||| Sbjct 130496 AGAACAAGGTGAAGAGTCGACTCTTTTTGGATGTTGTAGTCTGCAAGAGTACGACCATCC 130555 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || || |||||||| | ||| ||||| || || |||||| || Sbjct 130556 TCAAGCTGCTTACCAGCAAAGATGAGTCTCTGTTGGTCTGGTGGGATCCCTTCTTTGTCT 130615 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 ||||||||| |||||| || || ||||||| | || || ||||| || || || Sbjct 130616 TGAATCTTTGCCTTCACATTATCTACAGTGTCTGAGCTCTCAACCTCCAAAGTTATGGTT 130675 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || |||||||| || Sbjct 130676 TTTCCGGTTAGGGTCTTGACAAAAATCTG 130704 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | ||| || || |||||||| |||| |||||| ||||| | ||| | ||||| Sbjct 130724 AGGACCAAGTGCAGGGTTGACTCCTTCTGGATGTTGTAATCAGCAAGAGTTCGACCATCC 130783 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || ||||| || || ||||||||||| | ||| ||||||||| || ||||| || Sbjct 130784 TCAAGCTGTTTACCAGCGAAGATGAGTCTCTGTTGGTCCGGAGGGATCCCTTCCTTGTCT 130843 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || || ||| |||||| ||||| ||||| | | || || ||||| || || || Sbjct 130844 TGGATTTTTGTCTTCACATTGTCGACTGTGTCCGAGCTCTCCACTTCCAAAGTTATGGTT 130903 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || |||||||| || Sbjct 130904 TTTCCGGTAAGGGTCTTAACAAAAATCTG 130932 Score = 100 bits (110), Expect = 7e-16 Identities = 142/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 || || || || || || |||| |||||| || || | ||| | ||||| || ||||| Sbjct 131189 TGAAGGGTTGATTCTTTCTGGATGTTGTAATCGGCAAGAGTGCGACCATCCTCAAGCTGT 131248 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546 || || || |||||||| | ||| ||||||||| |||||||| || |||||||| Sbjct 131249 TTACCAGCAAAGATGAGTCTCTGTTGGTCCGGAGGGATTCCTTCCTTGTCTTGAATCTTA 131308 Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606 || || || |||||||| | | || || || | || || || || || ||| Sbjct 131309 GCTTTAACATTGTCAACGGTGTCAGAGCTCTCAACTTCTAGGGTAATGGTTTTGCCAGTG 131368 Query 199607 AGAGTTTTCACAAAAATTTG 199626 || ||||||||||| ||||| Sbjct 131369 AGGGTTTTCACAAATATTTG 131388 >seq1 Length=111110 Score = 141 bits (156), Expect = 2e-28 Identities = 157/209 (75%), Gaps = 3/209 (1%) Strand=Plus/Minus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 || || |||||||| || |||| |||||| || || | |||||||| |||||||| ||| Sbjct 60623 TGAAGCGTCGACTCTTTCTGGATGTTGTAATCGGCGAGTGTCCTTCCGTCTTCCAGTTGC 60564 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546 || ||||||||||| ||||||||||| ||||| |||||||| || || ||||| Sbjct 60563 TTCCCGGCGAAGATCAGACGCTGCTGATCCGGTGGGATTCCTTCCTTGTCTTGGATCTTC 60504 Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606 |||||| |||| ||||| | || ||| || || | || |||||||| ||||| Sbjct 60503 GCCTTCACATTGTCGATTGTGTCCGATGATTCAACCTCTAGGGTTATCGTCTTCCCCGTT 60444 Query 199607 AGAGTTTTCACAAAAATTTGGTACATTTT 199635 || |||||||| || || || |||||| Sbjct 60443 AGGGTTTTCACGAAGATCTG---CATTTT 60418 Score = 89.7 bits (98), Expect = 1e-12 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 200935 CTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAG 200994 || ||||||||||| ||||| ||||||| |||||||| | |||||||||||| ||||| Sbjct 60547 CTGATCTTCGCCGGGAAGCAACTGGAAGACGGAAGGACACTCGCCGATTACAACATCCAG 60606 Query 200995 AAAGAGTCTACTCTTCA 201011 |||||||| || ||||| Sbjct 60607 AAAGAGTCGACGCTTCA 60623 >seq516 Length=37039 Score = 132 bits (146), Expect = 1e-25 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||| |||||||| || || || |||||||||| ||||||||| || | ||| Sbjct 9996 CGAAGACGCAGCACAAGGTGAAGTGTTGATTCCTTTTGGATGTTGTAGTCTGCAAGAGTA 10055 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| || |||||||| || || |||||||| | || ||||| || || ||| Sbjct 10056 CGACCATCCTCAAGCTGCTTACCAGCAAAGATGAGTCTTTGTTGGTCTGGTGGGATCCCT 10115 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 ||| || ||||||||| ||| || || | ||||||| | || || ||||| Sbjct 10116 TCTTTGTCTTGAATCTTTGCCTTTACATTATCTATTGTGTCTGAGCTCTCAACCTCCAAA 10175 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || || |||||||||||||| || Sbjct 10176 GTTATGGTTTTGCCAGTTAGGGTTTTCACAAAAATCTG 10213 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || ||||| || ||||||||||| ||||||| |||||| || || ||| | | |||||| Sbjct 9777 AGAACAAGATGAAGAGTCGACTCTTTTTGGATGTTGTAATCCGCTAAAATGCGACCATCT 9836 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || || ||||| || | |||||||||||| || |||||| || Sbjct 9837 TCTAGCTGCTTCCCCGCAAAGATAAGCCTCTGCTGGTCCGGTTGGATCCCTTCTTTGTCA 9896 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 ||||||||| ||| || || || || || | | || || || | |||| ||| Sbjct 9897 TGAATCTTTGCCTTGACATTGTCAACCGTATCAGAACTCTCGACCTCAAGAATGATGGTC 9956 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| | ||| || |||||||| || Sbjct 9957 TTGCCCGTCAAAGTCTTGACAAAAATCTG 9985 Score = 118 bits (130), Expect = 2e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||||||||||| || || |||||||| || | |||||| ||||| | ||| Sbjct 10224 CGAAGACGAAGGACAAGGTGAAGTGTTGACTCCTTCTGAATGTTGTAATCAGCAAGAGTG 10283 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||| |||||||| |||||||| ||||| | || ||||| || || ||| Sbjct 10284 CGACCATCTTCGAGCTGCTTGCCGGCGAATATGAGTCTTTGTTGGTCTGGTGGGATCCCT 10343 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || || ||||| |||||| || | ||| |||| |||| || ||||| Sbjct 10344 TCCTTGTCTTGGATCTTGGCCTTCACATTGTCAATGGTATCTGAGCTTTCAACCTCCAAA 10403 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || ||||| || || || || || || || || Sbjct 10404 GTTATGGTTTTACCGGTAAGGGTCTTGACGAATATCTG 10441 >seq863 Length=117140 Score = 111 bits (122), Expect = 4e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || || || || ||||| ||||| |||| ||||||||| || | ||| | || ||| Sbjct 77650 AGCACCAGATGAAGCGTCGATTCCTTCTGGATGTTGTAGTCGGCGAGAGTACGGCCGTCT 77709 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || ||||| || |||||||| || | |||||||||||||| ||||| || || Sbjct 77710 TCGAGCTGTTTCCCGGCGAAAATCAATCGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCT 77769 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| || || |||| |||||| | | || || || | ||||| ||| Sbjct 77770 TGGATCTTCGCTTTGACATTGTCGATGGTGTCAGAGGACTCGACCTCAAGGGTGATGGTC 77829 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||||| || |||||||| || || || Sbjct 77830 TTACCCGTTAGGGTTTTCACGAAGATCTG 77858 >seq2666 Length=20083 Score = 109 bits (120), Expect = 1e-18 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || |||||||| || || || |||||||||| ||| ||||| || | ||| Sbjct 9288 CGAAGACGAAGCACAAGGTGAAGTGTTGATTCCTTTTGGATGTTATAGTCTGCAAGAGTG 9347 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 |||||||| || ||||| || |||||||| || | ||| ||||| | || ||| Sbjct 9348 TGACCATCTTCAAGTTGCTTGCCAGCGAAGATAAGTCTCTGTTGGTCTGCTTGGATCCCT 9407 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 ||| || |||||||| ||| || || |||||||| | | || || || | Sbjct 9408 TCTTTGTCGTGAATCTTGGCCTTGACATTGTCAACGGTGTCAGAGCTCTCAACTTCTAGG 9467 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || || |||||||||||||| || Sbjct 9468 GTTATGGTTTTGCCAGTTAGGGTTTTCACAAAAATCTG 9505 >seq511 Length=102325 Score = 96.9 bits (106), Expect = 8e-15 Identities = 76/90 (84%), Gaps = 1/90 (1%) Strand=Plus/Minus Query 199440 CCTTT-TGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAG 199498 ||||| |||| |||||||||||||||||| | |||||||| ||||| |||||||||||| Sbjct 26499 CCTTTCTGGATGTTGTAGTCAGCCAAAGTACGGCCATCTTCGAGCTGTTTTCCGGCGAAG 26440 Query 199499 ATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 || | |||||||| |||||| |||||| Sbjct 26439 ATCAATCGCTGCTGATCCGGAGGGATTCCT 26410 >seq216 Length=99943 Score = 87.8 bits (96), Expect = 4e-12 Identities = 74/90 (82%), Gaps = 1/90 (1%) Strand=Plus/Minus Query 199440 CCTTT-TGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAG 199498 ||||| |||| ||||||||||||||| || | |||||||| ||||| |||||||||||| Sbjct 7155 CCTTTCTGGATGTTGTAGTCAGCCAAGGTGCGACCATCTTCTAGCTGTTTTCCGGCGAAG 7096 Query 199499 ATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 || | | |||||| |||||| |||||| Sbjct 7095 ATCAACCTCTGCTGATCCGGAGGGATTCCT 7066 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178803630473270