Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Barbarea_20vulgaris_20[genbank_20GCA_5F001920985.1_202016-12-23] 7,810 sequences; 167,352,128 total letters Query= NC_019401.1 Length=358663 Score E Sequences producing significant alignments: (Bits) Value seq113 95.1 3e-14 >seq113 Length=64954 Score = 95.1 bits (104), Expect = 3e-14 Identities = 144/199 (72%), Gaps = 6/199 (3%) Strand=Plus/Plus Query 150364 GATTCTTTCTCGTAAAACCAAAAAGAATG--GTGCGTTAGTTGGTGAACCAGGTGTTGGT 150421 ||||||||| | | ||| || || ||| |||| ||| |||| || ||||| |||||| Sbjct 2783 GATTCTTTCAAGAAGAACAAAGAACAATCCAGTGC-TTA-TTGGAGAGCCAGGAGTTGGT 2840 Query 150422 AAAACACAAATCGTTGACGGATTAGCACAACGCATCGCTAATGGTGATGTTCCAGATTCT 150481 ||||| | ||||| || ||||||||| | || | || || |||||||| | | Sbjct 2841 AAAACGGCTGTGGTTGAAGGTTTAGCACAAAGGATTGTGAAAGGAGATGTTCCCAACAGT 2900 Query 150482 ATGAAAGATGTTGAAATT-CTTTCTTTGAATATGGGTGCATTTACTGCTGGTACTAAGTA 150540 | | |||| ||| ||| |||||||| | ||||||||||| ||||||| |||| || Sbjct 2901 CTTACTGATG-TGAGATTGATTTCTTTGGACATGGGTGCATTAGTTGCTGGTGCTAAATA 2959 Query 150541 TCGTGGTGAATTCGAAGAA 150559 || || || || |||||| Sbjct 2960 CCGAGGAGAGTTTGAAGAA 2978 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1147475565649380