Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Barbarea_20vulgaris_20[genbank_20GCA_5F001920985.1_202016-12-23] 7,810 sequences; 167,352,128 total letters Query= NC_023587.1 Length=189311 Score E Sequences producing significant alignments: (Bits) Value seq317 132 6e-26 >seq317 Length=114279 Score = 132 bits (146), Expect = 6e-26 Identities = 161/218 (74%), Gaps = 6/218 (3%) Strand=Plus/Plus Query 138538 TACATCCTTGATGCTGCTGATGAAGCAGGTATTGATCTTCCCTACTCCTGTCGTGCTGGT 138597 ||| |||| || || ||||| ||||| || ||||| | || ||||| || ||||||||| Sbjct 8598 TACGTCCTCGACGCAGCTGAGGAAGCTGGAATTGACTTGCCTTACTCATGCCGTGCTGGT 8657 Query 138598 GCATGTTCTACCTGTGCTGGTAAATTAGTTGA---AGGAACTGTAGATCAGTCTGACCAG 138654 | || || |||||||||||||| |||||| || ||||| ||||||||||||||| Sbjct 8658 TCTTGCTCAACCTGTGCTGGTAA---AGTTGAGTCTGGTACTGTTGATCAGTCTGACCAG 8714 Query 138655 TCTTTCCTTGATGATGACCAAATTGCAGCAGGATTTATCATGACTTGCGTAGCATACCCC 138714 ||||||||||||||| || |||| | ||||| | | | ||||| | || || || Sbjct 8715 AGTTTCCTTGATGATGAACAGATTGGTGAAGGATATGTTCTCACTTGTGCGGCTTATCCT 8774 Query 138715 ACATCCGATTGTATAATTGAAACTGAAAAAGAGGACGA 138752 || || ||| | | ||| |||| | |||| || || Sbjct 8775 ACTTCTGATGTTGTCATTAGAACTCACCAAGAAGAAGA 8812 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 605608071739600