Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Barbarea_20vulgaris_20[genbank_20GCA_5F001920985.1_202016-12-23] 7,810 sequences; 167,352,128 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq3586 95.1 1e-14 >seq3586 Length=17470 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||||| || || |||||| | || || || | ||||| |||| ||||| | Sbjct 5309 ATGCAAGTTTTCGTGAAAACACTCACTGGCAAGACCATCACTCTCGATGTCGAGAGCTCT 5368 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 ||||| ||||| | || || ||| ||| ||||| || || || || || |||||| Sbjct 5369 GATACCATCGACAATGTTAAGGCAAAGATTCAGGATAAGGAAGGCATTCCTCCGGATCAG 5428 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 ||||| | || | || ||| ||||| || ||||||| | | | ||||||||| Sbjct 5429 CAAAGGTTGATCTTCGCCGGAAAACAGCTAGAAGATGGCCGTACCTTGGCCGATTACAAC 5488 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 || || |||||||| ||| | || || || | |||| ||||| || Sbjct 5489 ATCCAGAAAGAATCAACCCTCCACTTGGTTCTCCGATTAAGAGGTGG 5535 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445050947659200