Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Barbarea_20vulgaris_20[genbank_20GCA_5F001920985.1_202016-12-23] 7,810 sequences; 167,352,128 total letters Query= NC_026926.1 Length=192108 Score E Sequences producing significant alignments: (Bits) Value seq317 86.0 8e-12 >seq317 Length=114279 Score = 86.0 bits (94), Expect = 8e-12 Identities = 128/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 179483 TCCTTGACGCTGCTGAAGAAGCAGGTGTAGATATCAATTACTCTTGTCGTGCTGGTGCTT 179542 |||| ||||| ||||| ||||| || | || | |||||| || ||||||||| ||| Sbjct 8602 TCCTCGACGCAGCTGAGGAAGCTGGAATTGACTTGCCTTACTCATGCCGTGCTGGTTCTT 8661 Query 179543 GTTCATCTTGTGCTGGTAAATTAGAGAGTGGATCTGTTGATCAAAGCGATCAATCGTTTT 179602 | ||| | |||||||||||| | ||| ||| |||||||||| || || || Sbjct 8662 GCTCAACCTGTGCTGGTAAAGTTGAGTCTGGTACTGTTGATCAGTCTGACCAGAGTTTCC 8721 Query 179603 TGGATGACGATCAAATGGAGTCGGGATTTATTCTGACTTGCGTATCTTATCCTACTAGTG 179662 | ||||| || || || | |||| | |||| ||||| | ||||||||||| || Sbjct 8722 TTGATGATGAACAGATTGGTGAAGGATATGTTCTCACTTGTGCGGCTTATCCTACTTCTG 8781 Query 179663 AT 179664 || Sbjct 8782 AT 8783 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 614557597956800