Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Barbarea_20vulgaris_20[genbank_20GCA_5F001920985.1_202016-12-23] 7,810 sequences; 167,352,128 total letters Query= NC_026928.1 Length=189418 Score E Sequences producing significant alignments: (Bits) Value seq317 116 4e-21 >seq317 Length=114279 Score = 116 bits (128), Expect = 4e-21 Identities = 135/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 176350 TCCTTGACGCTGCTGAAGAAGCAGGTGTAGATATCAATTACTCTTGTCGTGCTGGTGCTT 176409 |||| ||||| ||||| ||||| || | || | |||||| || ||||||||| ||| Sbjct 8602 TCCTCGACGCAGCTGAGGAAGCTGGAATTGACTTGCCTTACTCATGCCGTGCTGGTTCTT 8661 Query 176410 GTTCATCTTGTGCTGGCAAACTAGAGAGTGGTTCTGTTGATCAGAGTGATCAGTCTTTCC 176469 | ||| | |||||||| ||| | ||| |||| ||||||||||| ||| ||| ||||| Sbjct 8662 GCTCAACCTGTGCTGGTAAAGTTGAGTCTGGTACTGTTGATCAGTCTGACCAGAGTTTCC 8721 Query 176470 TGGATGATGATCAAATTGAATCTGGTTTTATTCTGACTTGCGTATCTTATCCTACTAGTG 176529 | |||||||| || |||| || | | |||| ||||| | ||||||||||| || Sbjct 8722 TTGATGATGAACAGATTGGTGAAGGATATGTTCTCACTTGTGCGGCTTATCCTACTTCTG 8781 Query 176530 AT 176531 || Sbjct 8782 AT 8783 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 605950438312800