Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Barbarea_20vulgaris_20[genbank_20GCA_5F001920985.1_202016-12-23] 7,810 sequences; 167,352,128 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq144 100 9e-16 >seq144 Length=115930 Score = 100 bits (110), Expect = 9e-16 Identities = 128/175 (73%), Gaps = 1/175 (1%) Strand=Plus/Plus Query 443699 CTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTT 443758 ||||| || ||| | || ||||| ||| || ||||| | || || ||| ||||| Sbjct 55936 CTTCGCTGAACGAATCGTAGCTTTCGCTTGCGTTGAAGGTATCTTCTTCTCCGGTAGCTT 55995 Query 443759 TAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACG 443818 || |||||||||||| | || || || ||||| |||| ||| | ||||| ||||| Sbjct 55996 CTGC-TCCATCTTCTGGCTTAAGAAACGAGGACTCATGCCTGGTTTAACCTTCTCTAACG 56054 Query 443819 AACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTACAC 443873 || ||||| ||| ||||| || || || ||||| ||||| || || |||||||| Sbjct 56055 AATTGATCTCTCGAGACGAAGGCTTACACTGCGATTTCGCTTGCCTCCTCTACAC 56109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588177062165450