Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Barbarea_20vulgaris_20[genbank_20GCA_5F001920985.1_202016-12-23] 7,810 sequences; 167,352,128 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq210 86.0 5e-12 >seq210 Length=153681 Score = 86.0 bits (94), Expect = 5e-12 Identities = 142/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 111705 TTGTAAAGGCTGTATGTGATTTAAATAAACATGCGCATCTCCTATACAATGGATCAATTC 111764 ||| | |||| || |||||| || ||||| ||||| || ||| |||||| || || Sbjct 139848 TTGCAGAGGCCTTACATGATTTTTGTACACATGAGCATCCCCAATAACATGGATAAAATC 139789 Query 111765 CCAAGGCTCCAAACCAGTGATGTGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAAT 111824 | ||| | | | || | ||| || | ||| | || || ||| ||| |||||| Sbjct 139788 ACCAGGAACAAGATCACACACGTGAGCGAGCATACAAGTAAGAAGAGAGTAGGAAGCAAT 139729 Query 111825 GTTAAATGGCACACCTAGGCCCATATCTCCCGATCTTTGATATAGCTGACATGATAGTTT 111884 |||||| || ||||| |||||||| || | || | ||||| | |||||||| |||| Sbjct 139728 GTTAAACGGTACACCAAGGCCCATGTCCGCTGAACGCTGATACATTTGACATGAGAGTTC 139669 Query 111885 ATTTTGTGACACATAAAATTGACAA 111909 || || ||||||||| ||| || Sbjct 139668 TCCTTCTGCCACATAAAACTGAAAA 139644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391908292903030