Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Barbarea_20vulgaris_20[genbank_20GCA_5F001920985.1_202016-12-23] 7,810 sequences; 167,352,128 total letters Query= NC_028663.1 Length=188632 Score E Sequences producing significant alignments: (Bits) Value seq2524 87.8 2e-12 >seq2524 Length=29166 Score = 87.8 bits (96), Expect = 2e-12 Identities = 143/194 (74%), Gaps = 23/194 (12%) Strand=Plus/Plus Query 176479 ATGCGTCCTTGGATCTGTGTTGCATACTCTGCACCAGTATCTGCAGCGATG---GCAGTT 176535 ||||||||||| | ||| | |||||| || | || ||||||| | || ||| Sbjct 13567 ATGCGTCCTTGATTGGCTGT-GAATACTCAGCTCT-GT---TGCAGCGCTAACTGCTGTT 13621 Query 176536 TTCCTCGTCTATCCATTCGGTCAAGGATC-TTTCTCTGATGGTATGCCTCTTGGCATTTC 176594 ||| | |||||||||| ||||| ||| | ||| |||||||||||||||||| | | || Sbjct 13622 TTCTTGATCTATCCATT-GGTCAGGGAACGTTTTTCTGATGGTATGCCTCTTAGGAACTC 13680 Query 176595 AGG-TACATTCAACTTTATG-TTTG---TATTCCAAGC-----AGAGCACAACA--TTCT 176642 || ||| |||||||||||| |||| | |||| ||| |||||||||| |||| Sbjct 13681 TGGTTACTTTCAACTTTATGATTTGTTATTTTCCTAGCTTCCAGGAGCACAACATGTTCT 13740 Query 176643 AATG-CACCCATTC 176655 ||| ||||||||| Sbjct 13741 TATGTCACCCATTC 13754 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 603435483859200