Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Barbarea_20vulgaris_20[genbank_20GCA_5F001920985.1_202016-12-23] 7,810 sequences; 167,352,128 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq210 102 7e-17 >seq210 Length=153681 Score = 102 bits (112), Expect = 7e-17 Identities = 134/186 (72%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 118480 TGATTCATATAGACATGAGCATCCCCAATTGTATGTATGAATTCACCAGGTGTAAGCCCT 118539 ||||| | || ||||||||||||||||| ||| || || |||||||| ||| | Sbjct 139832 TGATTTTTGTACACATGAGCATCCCCAATAACATGGATAAAATCACCAGGAACAAGATCA 139773 Query 118540 GTCAGGTGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGAACACCC 118599 || |||||| | ||| | || | | | |||| || | ||||| || ||||| Sbjct 139772 CACACGTGAGCGAGCATACAAGTAAGAAGAGAGTAGGAAGCAATGTTAAACGGTACACCA 139713 Query 118600 AGACCCATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCAACATAA 118659 || |||||||| ||||| | ||| |||| ||| || ||||| || || | ||| |||||| Sbjct 139712 AGGCCCATGTCCGCTGAACGCTGATACATTTGACATGAGAGTTCTCCTTCTGCCACATAA 139653 Query 118660 AACTGA 118665 |||||| Sbjct 139652 AACTGA 139647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414437348284840