Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Beta_20vulgaris_20subsp._20vulgaris_20[refseq_20GCF_5F000511025.2_20 2015-07-07] 40,246 sequences; 566,550,431 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq146 116 5e-21 >seq146 Length=1334862 Score = 116 bits (128), Expect = 5e-21 Identities = 160/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 146047 CGTTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATC 146106 ||| ||||| | ||| |||| ||||| || | || |||||||| || || ||||| Sbjct 1120099 CGTACCACCACGAAGCCTTAGCACCAAGTGAAGCGTTGATTCTTTCTGAATGTTGTAATC 1120040 Query 146107 TGAAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGG 146166 || |||||||| | ||| || ||||||||||| || ||||||| | ||| ||||| || Sbjct 1120039 TGCGAGAGTTCTTCCATCTTCCAATTGTTTTCCGGCGAAAATCAGGCGTTGTTGATCTGG 1119980 Query 146167 AGGAATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTC 146226 |||||||||||||| ||||| ||||| ||| ||| Sbjct 1119979 TGGAATTCCTTCTTTGTCTTGGATCTTTGTTTTCACGTTGTCGATTGTATCGGAAGATTC 1119920 Query 146227 TACTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCATT 146278 |||||||| || || ||||| || |||| ||||| | ||| || |||||| Sbjct 1119919 CACTTCTAGGGTTATGGTTTTTCCAGTTAGGGTTTTCACGAAAATCTGCATT 1119868 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 743152350456320