Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Beta_20vulgaris_20subsp._20vulgaris_20[refseq_20GCF_5F000511025.2_20 2015-07-07] 40,246 sequences; 566,550,431 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq146 158 3e-33 seq157 154 3e-32 seq58 149 1e-30 seq57 149 1e-30 seq1 132 1e-25 seq170 125 2e-23 seq127 118 2e-21 seq145 107 4e-18 seq180 102 2e-16 seq96 87.8 4e-12 >seq146 Length=1334862 Score = 158 bits (174), Expect = 3e-33 Identities = 168/222 (76%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 ||||| || || | || | || |||||||||||||| || || || | |||||||| Sbjct 1120086 AGCCTTAGCACCAAGTGAAGCGTTGATTCTTTCTGAATGTTGTAATCTGCGAGAGTTCTT 1120027 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 || ||||| | ||||||||| || ||||| || | |||||||| || || ||||||||| Sbjct 1120026 CCATCTTCCAATTGTTTTCCGGCGAAAATCAGGCGTTGTTGATCTGGTGGAATTCCTTCT 1119967 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTA 104521 || || || ||||||| ||| || || || | |||||| || ||| || ||||| || Sbjct 1119966 TTGTCTTGGATCTTTGTTTTCACGTTGTCGATTGTATCGGAAGATTCCACTTCTAGGGTT 1119907 Query 104522 ATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563 || || || ||||| || ||||| || || ||||||||| || Sbjct 1119906 ATGGTTTTTCCAGTTAGGGTTTTCACGAAAATCTGCATTCTG 1119865 >seq157 Length=426068 Score = 154 bits (170), Expect = 3e-32 Identities = 155/200 (78%), Gaps = 6/200 (3%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 ||||| || ||||| |||||||| |||| |||||| | ||| || || |||||||||||| Sbjct 398253 GTAGACTCCTTCTGGATATTATAATCAGCTAGAGTACGACCATCCTCGAGTTGTTTTCCA 398194 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || ||||||||||| || || || || ||||| || || ||||| || || || Sbjct 398193 GCAAAGATCAGCCTCTGTTGGTCTGGTGGAATCCCTTCCTTGTCTTGAATTTTAGCCTTA 398134 Query 104483 ACATTTTCTACGGTATC---GCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGT 104539 ||||| || | ||| || ||| ||| ||||| || ||||| ||||| || || || Sbjct 398133 ACATTGTCAATGGTGTCAGAGCT---TTCAACCTCAAGGGTAATGGTCTTCCCTGTTAGG 398077 Query 104540 GTTTTTACAAATATCTGCAT 104559 ||||| ||||| || ||||| Sbjct 398076 GTTTTGACAAAGATTTGCAT 398057 Score = 125 bits (138), Expect = 2e-23 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || ||||| | || || || ||||||||||| || |||| || |||| || ||| Sbjct 398040 AGGACAAGATGAAGGGTTGACTCCTTCTGAATATTGTAATCAGCAAGGGTTCGGCCATCT 397981 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || ||||| || || ||||| || || | || || |||||||| || || || || || Sbjct 397980 TCGAGTTGCTTACCGGCAAAGATCAGACGTTGCTGGTCAGGAGGAATGCCCTCCTTGTCT 397921 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 ||||||||||| || ||||| || | ||||| | || ||||| || || || ||| Sbjct 397920 TGAATCTTTGCCTTAACATTGTCAATTGTATCAGAACTCTCCACCTCGAGAGTGATCGTC 397861 Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 |||||||| | || || ||||| || ||||| Sbjct 397860 TTACCAGTCAAGGTCTTAACAAAGATTTGCAT 397829 Score = 122 bits (134), Expect = 2e-22 Identities = 157/214 (73%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| |||| ||| | ||||| || || || ||||| || || | | ||| | ||| || Sbjct 398497 AAGGACTAAATGAAGGGTAGACTCCTTTTGGATATTGTAATCTGCCAAAGTACGACCATC 398438 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || ||||| || || ||||| || |||||||||||||| || || || ||||| || || Sbjct 398437 CTCAAGTTGCTTACCGGCAAAGATGAGCCTCTGTTGATCTGGTGGGATACCTTCCTTGTC 398378 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAG 104525 || ||||| || || ||||| || | ||||| || | || ||||| | ||||| | Sbjct 398377 TTGTATCTTAGCCTTCACATTGTCAATCGTATC-AGAGCTCTCAACCTCCAAAGTAATGG 398319 Query 104526 TCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 |||| ||||| || || || ||||| || ||||| Sbjct 398318 TCTTTCCAGTGAGAGTCTTGACAAAGATTTGCAT 398285 Score = 102 bits (112), Expect = 2e-16 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 ||||| || ||||| || || || || | | || | |||||| || || || |||||| Sbjct 398709 GTAGACTCCTTCTGGATGTTGTAATCTGCCAATGTACGACCGTCCTCGAGCTGCTTTCCA 398650 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || ||||| || || || || || || || || || || || |||||||| || Sbjct 398649 GCAAAGATAAGCCTTTGCTGGTCTGGTGGGATACCCTCCTTGTCTTGTATCTTTGCCTTC 398590 Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 ||||| || | ||||| | || | || ||||| | ||||| ||||| || || || || Sbjct 398589 ACATTGTCAATTGTATC-CGAGCTCTCGACCTCCAAAGTAATGGTCTTTCCTGTGAGAGT 398531 Query 104542 TTTTACAAATATCTGCAT 104559 || || || || ||||| Sbjct 398530 CTTGACGAAAATTTGCAT 398513 >seq58 Length=2649046 Score = 149 bits (164), Expect = 1e-30 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||||| | || || ||||| | || || || || || || || ||||| Sbjct 1146700 ATACCTCCTCTTAAACGGAGGACAAGATGGAGAGTTGACTCCTTTTGGATGTTGTAGTCG 1146641 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | ||||||| |||||||| ||||||||||| ||||| |||| | |||||||| ||| Sbjct 1146640 GCGAGAGTTCGGCCGTCTTCAAGTTGTTTTCCGGCAAAGATTAAACGTTGTTGATCTGGA 1146581 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || |||||||| || || || |||||||| ||||| || || | ||| ||| | || Sbjct 1146580 GGAATTCCTTCCTTGTCTTGGATCTTTGCCTTTACGTTGTCGATGGTGTCGGAACTCTCA 1146521 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| || || || ||||| || ||||| ||||| || || || ||||| Sbjct 1146520 ACCTCGAGAGTTATGGTCTTGCCGGTAAGGGTTTTCACGAAGATTTGCAT 1146471 Score = 120 bits (132), Expect = 7e-22 Identities = 147/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || ||||| ||||| ||||| || |||| | ||| | || ||||| || || || ||| Sbjct 1147123 GTGGATTCCTTCTGGATATTGTAATCAGCCAAAGTACGGCCATCTTCGAGCTGCTTACCA 1147064 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || | |||||| || || ||||| || ||||| || ||||||||||| || || Sbjct 1147063 GCAAAGATCAACCTCTGCTGGTCTGGAGGAATACCTTCCTTGTCCTGAATCTTAGCCTTA 1147004 Query 104483 ACATTTTCTACGGTATCGCTAG-GTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 ||||| || | ||||| | || ||| || || | ||||| ||||| || || || || Sbjct 1147003 ACATTGTCGATCGTATC-CGAGCTTTCAACTTCCAAAGTAATCGTCTTCCCGGTGAGAGT 1146945 Query 104542 TTTTACAAATATCTGCAT 104559 || ||||| || ||||| Sbjct 1146944 CTTCACAAAGATTTGCAT 1146927 Score = 118 bits (130), Expect = 2e-21 Identities = 147/199 (74%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || |||||||| || || |||| | ||| | || || || ||||| |||||| Sbjct 1147807 GTGGACTCCTTCTGAATGTTGTAATCAGCCAAAGTACGTCCATCCTCAAGTTGCTTTCCA 1147748 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || | |||||| || ||||| || || || || |||||||||||||| || || Sbjct 1147747 GCAAAGATCAACCTCTGCTGGTCAGGTGGAATACCCTCCTTATCCTGAATCTTGGCCTTC 1147688 Query 104483 ACATTTTCTACGGTATCGCTAG-GTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 ||||| || | || || | || ||| ||||| | || || || || ||||| | || Sbjct 1147687 ACATTATCAATCGTGTC-CGAGCTTTCAACCTCCAAAGTGATGGTTTTCCCAGTCAAGGT 1147629 Query 104542 TTTTACAAATATCTGCATT 104560 || ||||| ||||||||| Sbjct 1147628 CTTAACAAAGATCTGCATT 1147610 Score = 113 bits (124), Expect = 1e-19 Identities = 165/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| || || | | ||| || | || | ||||| || || || ||||| || || Sbjct 1147612 ATTCCTCCCCTCAAACGAAGCACCAAGTGAAGGGTAGACTCCTTTTGGATATTGTAATCC 1147553 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | ||||| || || || || || || || ||||||||||| | |||||| || || || Sbjct 1147552 GCAAGAGTCCTCCCATCCTCAAGCTGCTTACCAGCAAAAATCAACCTCTGCTGGTCTGGG 1147493 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508 || || || || |||||||| |||||||| || ||||| || | || || | || | || Sbjct 1147492 GGAATACCCTCCTTATCCTGGATCTTTGCCTTGACATTGTCGATCGTGTC-CGAGCTCTC 1147434 Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| | || || ||||| || || | || || ||||| |||||||| Sbjct 1147433 AACCTCCAAAGTGATGGTCTTCCCGGTCAAGGTCTTCACAAAAATCTGCAT 1147383 >seq57 Length=33024243 Score = 149 bits (164), Expect = 1e-30 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392 || ||||| || | ||| || || || | || || |||||||| || || || |||| Sbjct 18658232 CCACCTCTCAGACGAAGAACAAGGTGAAGAGTCGACTCTTTCTGGATGTTGTAATCAGCA 18658291 Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452 || || | ||| ||||| ||||||||||| || ||||| || | ||||| || || || Sbjct 18658292 AGTGTGCGACCATCTTCAAGTTGTTTTCCGGCGAAAATCAGACGTTGTTGGTCTGGTGGA 18658351 Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512 || |||||||| || || ||||||||||| ||||| || | ||| ||| | ||| || Sbjct 18658352 ATGCCTTCTTTGTCTTGGATCTTTGCTTTCACATTGTCGATGGTGTCGGAGGATTCGACT 18658411 Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562 ||||| || || || ||||| || || ||||| || || |||||||| || Sbjct 18658412 TCTAGGGTTATGGTTTTACCCGTTAGGGTTTTCACGAAGATCTGCATCTT 18658461 >seq1 Length=34941034 Score = 132 bits (146), Expect = 1e-25 Identities = 157/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || || || | || || || ||||||||||| || || | ||||||| || || Sbjct 3650688 AAGGACAAGGTGAAGGGTCGACTCCTTCTGAATATTGTAATCTGCCAGAGTTCGCCCATC 3650629 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || | || || |||||||| || || ||||| ||||| ||||| || ||||| || || Sbjct 3650628 CTCCAACTGCTTCCCAGCAAAGATGAGTCTCTGCTGATCTGGAGGGATACCTTCCTTGTC 3650569 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 ||||||||| | || ||||| || | ||||| | || ||||| || || ||||| Sbjct 3650568 CTGAATCTTGGTCTTCACATTATCAATTGTATCAGAACTCTCCACCTCAAGGGTGATAGT 3650509 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||| ||||| || || || ||||| |||||||| Sbjct 3650508 CTTCCCAGTGAGGGTCTTCACAAAGATCTGCAT 3650476 Score = 122 bits (134), Expect = 2e-22 Identities = 167/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || || || || | ||| || | ||| | || ||||| || || || || ||||| Sbjct 3649565 ATGCCACCCCTGAGACGAAGAACCAAATGAAGAGTTGATTCCTTTTGGATGTTGTAGTCT 3649506 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | || || || || || || |||||||| |||||||| || |||||||| ||||| || Sbjct 3649505 GCTAACGTCCTTCCATCCTCCAGTTGTTTCCCAGCAAAGATCAGCCTCTGCTGATCTGGT 3649446 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508 || || || || || ||||| ||||| | || ||||| || | || || || | || Sbjct 3649445 GGAATCCCCTCCTTGTCCTGGATCTTGGTCTTGACATTATCGATTGTGTCTG-AGCTCTC 3649387 Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || ||||||||||| || || || ||||| ||||| || ||||| Sbjct 3649386 GACTTCGAGAGTAATAGTCTTTCCGGTGAGAGTTTTCACAAAGATTTGCAT 3649336 Score = 105 bits (116), Expect = 2e-17 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || || || || || || || ||||| |||||||| || | | || || || || Sbjct 3650004 AAGCACCAGGTGCAAAGTGGACTCCTTCTGGATATTATAATCGGCCAATGTCCTGCCATC 3649945 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || || ||||| || ||||| || |||||||| || || || || |||||||| || || Sbjct 3649944 CTCAAGCTGTTTACCGGCAAAGATGAGCCTCTGCTGGTCTGGTGGGATTCCTTCCTTGTC 3649885 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 ||||||||| | || || || || | || || | || || || | || | || Sbjct 3649884 CTGAATCTTAGTCTTGACGTTCTCAATAGTGTCAGAACTCTCAACTTCCAAGGTTACTGT 3649825 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||| || || || ||||| ||||| |||||||| Sbjct 3649824 CTTGCCTGTGAGGGTTTTAACAAAGATCTGCAT 3649792 >seq170 Length=38796167 Score = 125 bits (138), Expect = 2e-23 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104367 ATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAA 104426 ||||||||||||| || || || |||||||| || ||||| | |||||||| || | Sbjct 3261172 ATTCTTTCTGAATGTTGTAATCTACGAGAGTTCTTCCATCTTCCAATTGTTTTCTGGCGA 3261231 Query 104427 AAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACAT 104486 |||| || | |||||||| || | |||||||| || || || ||||||| ||| || | Sbjct 3261232 AAATCAGGCGTTGTTGATCTGGTGAAATTCCTTCCTTGTCTTGGATCTTTGTTTTCACGT 3261291 Query 104487 TTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTA 104546 | || | ||||| || ||| || ||||| || || || || | ||| | ||||| | Sbjct 3261292 TGTCGATTATATCGAAAGATTCGACTTCTAGGGTTATGGTTTTTCTAGTTACGGTTTTCA 3261351 Query 104547 CAAATATCTGCATTTTG 104563 | || |||||||||||| Sbjct 3261352 CGAAAATCTGCATTTTG 3261368 >seq127 Length=60962716 Score = 118 bits (130), Expect = 2e-21 Identities = 392/602 (65%), Gaps = 6/602 (1%) Strand=Plus/Minus Query 268691 AACCCAGATAGATT-TGTGATATTTCCAATACAGCATGGTGATATATGGAGGATGTACAA 268749 |||||||||| ||| ||| || || ||||| | | | || ||| |||||||| Sbjct 5747528 AACCCAGATAAATTCTGT-ATGTTCCCAATTGAATACCCACAAATCTGGGAAATGTACAA 5747470 Query 268750 ACAGGCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGACTTAATAGA 268809 | | |||| || || |||||||| | |||||||| ||||| || | || ||| | Sbjct 5747469 AAAAGCCGAAGCATCGTTTTGGACGGCTGAAGAAGTCGATCTATCATCCGATTTAGGTCA 5747410 Query 268810 TTGGAAAAATTTAAAACCAGAAGAAAGAAGATTT-ATATCTTATATTCTTGCGTTTTTTG 268868 ||| ||| ||| | || || | || |||| || | | |||| || || || | Sbjct 5747409 CTGGGAAACCCTAACTTCCGACGAGA-AACATTTCATTACACACGTTCTCGCCTTCTTCG 5747351 Query 268869 CAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGAGGTACAGA 268928 | | ||||| ||||| |||||||| | || ||| ||||||| || Sbjct 5747350 CCGCATCAGATGGAATCGTGCTGGAAAATCTCGCAGGTCGGTTTATGAAAGAGGTGCAAG 5747291 Query 268929 TTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCATTCAGAGA 268988 | ||||||| | |||||||| || || || || || ||||| |||||||| || | Sbjct 5747290 TCGCTGAAGCGCGCGCATTTTACGGTTTTCAAATCGCCATTGAAAACATTCATTCTGAAA 5747231 Query 268989 TGTACAGTCTATTAATAGATACTTATATAGATGATAACAACGAAAAGAAAAGACTATTTT 269048 ||||| || | |||| ||||| || | ||| || | ||| | || ||| Sbjct 5747230 TGTACTCACTCCTTTTAGAAACTTACATTAAGGATT-CATCCCAAAAATCTCACCTCTTT 5747172 Query 269049 CTT-CTATGAGAACTATGGACTGTGTGAGaaaaaaaTCTGAATGGGCTCTGAAATGGATA 269107 | | || ||| || |||||||| ||| || |||| ||||| |||| ||||| Sbjct 5747171 CGAGCAATCGAAACCGTGCCCTGTGTGAAAAAGAAGGCTGATTGGGCACTGAGGTGGATT 5747112 Query 269108 AACGATAGCGCGCCTTACGGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATTC 269167 | | | | | | ||| ||| || |||| ||||| | | ||||| |||||| Sbjct 5747111 GATGGGTCTGAATCATTTGCAGAGAGGATAATTGCGTTTGCTTGTATTGAAGGGATATTC 5747052 Query 269168 TTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATTA 269227 || || || ||| | | || |||||| | ||||| | || || ||||| || ||| Sbjct 5747051 TTCTCAGGAAGTTTCTGCTCCATTTTTTGGCTTAAGAAGCGTGGGCTAATGCCGGGTTTA 5746992 Query 269228 ACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACACTGCGACTTCGCTTGTTTA 269287 || || || || |||||||| | |||||||| | || || || || ||||||||| Sbjct 5746991 ACGTTTTCGAATGAATTGATCTCTCGAGACGAAGGACTTCATTGTGATTTTGCTTGTTTA 5746932 Query 269288 TT 269289 || Sbjct 5746931 TT 5746930 >seq145 Length=44152522 Score = 107 bits (118), Expect = 4e-18 Identities = 122/164 (74%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392 || ||||| || | || || || || | || || |||||||| || || || |||| Sbjct 33200774 CCACCTCTGAGACGGAGAACAAGGTGAAGAGTTGACTCTTTCTGGATGTTGTAATCAGCA 33200715 Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452 || || | ||| ||||| ||||||||||| || ||||| || | ||||| | || || Sbjct 33200714 AGTGTGCGACCATCTTCAAGTTGTTTTCCGGCGAAAATCAGACGTTGTTGGTGTGGTGGA 33200655 Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGT 104496 || ||||||||||| || ||||||||||| ||||| || | ||| Sbjct 33200654 ATGCCTTCTTTATCTTGGATCTTTGCTTTCACATTGTCGATGGT 33200611 >seq180 Length=370853 Score = 102 bits (112), Expect = 2e-16 Identities = 121/164 (74%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392 || ||||| || | || || || || | || || |||||||| || || || |||| Sbjct 23745 CCACCTCTGAGACGGAGAACAAGGTGAAGAGTCGACTCTTTCTGGATGTTGTAATCAGCA 23686 Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452 || || | ||| ||||| ||||||||||| || ||||| || | ||||| | || || Sbjct 23685 AGTGTGCGACCATCTTCAAGTTGTTTTCCGGCGAAAATCAGACGTTGTTGGTGTGGTGGA 23626 Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGT 104496 || |||||||| || || ||||||||||| ||||| || | ||| Sbjct 23625 ATGCCTTCTTTGTCTTGGATCTTTGCTTTCACATTGTCGATGGT 23582 >seq96 Length=52461754 Score = 87.8 bits (96), Expect = 4e-12 Identities = 95/125 (76%), Gaps = 1/125 (1%) Strand=Plus/Plus Query 104366 GATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCA 104425 || |||||||| || || || |||| || || | ||| ||||| | ||||||||| || Sbjct 45648250 GACTCTTTCTGGATGTTGTAATCAGCAAGTGTGCGACCATCTTCAA-TTGTTTTCCGGCG 45648308 Query 104426 AAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACA 104485 ||||| || | ||||| | || || || |||||||| || || ||||||||||| ||| Sbjct 45648309 AAAATCAGACGTTGTTGGTGTGGTGGAATGCCTTCTTTGTCTTGGATCTTTGCTTTCACA 45648368 Query 104486 TTTTC 104490 || || Sbjct 45648369 TTGTC 45648373 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1150804679256168