Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Beta_20vulgaris_20subsp._20vulgaris_20[refseq_20GCF_5F000511025.2_20 2015-07-07] 40,246 sequences; 566,550,431 total letters Query= NC_006884.2 Length=178249 Score E Sequences producing significant alignments: (Bits) Value seq96 291 9e-74 seq26327 288 1e-72 seq190 260 2e-64 seq3386 194 2e-44 seq13156 179 4e-40 seq22 174 2e-38 seq1964 123 3e-23 seq295 118 1e-21 seq43 116 4e-21 seq170 113 5e-20 seq78 111 2e-19 seq50 107 2e-18 seq126 105 8e-18 seq57 95.1 1e-14 seq252 93.3 5e-14 seq112 84.2 2e-11 >seq96 Length=52461754 Score = 291 bits (322), Expect = 9e-74 Identities = 548/806 (68%), Gaps = 21/806 (3%) Strand=Plus/Plus Query 171795 TTTGACGTTCTTGATGATTGGTTAAAGAGAGATCGTTTCGTATTCATCGGATGGTCTGGT 171854 ||||| ||| | ||||| |||||| ||| || |||||||| || | || ||||| ||| Sbjct 26530959 TTTGATGTTATGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGTTGGTCGGGT 26531018 Query 171855 CTTTTACTTTTACCTTGTGCTTACCTAGCAATCGGAGGTTGGTTCGTAGGAACTACTTTC 171914 || || || || ||||||||||| | || | ||||||||||| || || || || Sbjct 26531019 CTATTGCTCTTTCCTTGTGCTTATTTTGCCTTAGGAGGTTGGTTTACGGGTACAACCTTT 26531078 Query 171915 GTGACCTCATGGTACACACATGGTATTGCATCCTCATATCTTGAGGGAGCAAACTTTTTA 171974 || || |||||||| || ||||| | || || ||| | || || || || ||| Sbjct 26531079 GTAACTTCATGGTATACCCATGGATTGGCCAGTTCTTATTTGGAAGGCTGCAATTTCTTA 26531138 Query 171975 ACTGCAGCAGTATCAACACCTGGTGATGCTATGGGTCATAGTCTATTGTTCCTATGGGGA 172034 || |||||||| || || |||| | || | | | || | |||| || || ||||| Sbjct 26531139 ACCGCAGCAGTTTCTACTCCTGCTAATAGTTTAGCACACTCTTTATTATTACTCTGGGGT 26531198 Query 172035 CCTGAGGCACAAGGAGATCTTGTACGATGGTTTCAATTAGGTGGACTATGGAACTTTGTA 172094 ||||| |||||||| ||| || || |||| ||||||||| || || |||| ||||| Sbjct 26531199 CCTGAAGCACAAGGCGATTTTACTCGTTGGTGTCAATTAGGCGGCCTGTGGACTTTTGTT 26531258 Query 172095 GCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTTAGACAGTTTGAGATTGCAGGA 172154 || | ||||| | || ||||| |||||||| ||| | | || || || |||| || Sbjct 26531259 GCTCTTCATGGTGCTTTCGGACTAATAGGTTTTATGTTACGTCAATTCGAACTTGCTCGA 26531318 Query 172155 CTTGTTGGGATACGTCCTTACAACGCACTAGCATTCTCAGCAGTTATTGCAGTATTCACG 172214 |||| | || ||||| || ||| | |||||||| | ||||| || || Sbjct 26531319 TCTGTTCAATTGCGCCCTTATAATGCAATCGCATTCTCTGGTCCAATTGCTGTTTTTGTT 26531378 Query 172215 AGCATCTTTCTAATATATCCATTAGGTCAGCATAGTTGGTTCTTCGCACCTTCATTTGGT 172274 | || ||||| |||||| |||||||| | |||||||||| || ||| |||||| Sbjct 26531379 TCTGTATTCCTAATTTATCCACTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGT 26531438 Query 172275 GTCGCAGCAATCTTTCGTTATATTTTATTCATACAGGGTTTCCACAATATAACTCTTAAT 172334 || ||||| || ||||| | ||| | || | || || || || ||| || || || Sbjct 26531439 GTAGCAGCTATATTTCGATTCATTCTCTTTTTTCAAGGGTTTCATAATTGGACGCTGAAC 26531498 Query 172335 CCATTTCATATGATGGGTGTAGCAGGTATACTTGGTGGAGCATTACTATGTGCCATACAT 172394 ||||||||||||||||| || || ||| || | || | || | ||||| || || ||| Sbjct 26531499 CCATTTCATATGATGGGAGTTGCCGGTGTATTGGGCGCCGCTCTGCTATGCGCTATTCAT 26531558 Query 172395 GGTGCAACAGTACAGAACACATTGTATGAAGACACATCACAATACACTGAAGGTAAGATT 172454 ||||| || ||| | || || || | |||||| || | | | Sbjct 26531559 GGTGCTACGGTAGAAAATACTTTATTTGAAGA---------------TG--GTGATGGGG 26531601 Query 172455 CAATCTACAACTTTCAGAGCATTCGATCCTACACAGGAAGAAGAAACTTATAGTATGATT 172514 ||| |||| ||| | || || | || || || | |||||||||||| ||| | Sbjct 26531602 CAA-ATACA---TTCCGGGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTC 26531657 Query 172515 ACTGCTAACAGATTCTGGTCACAGATATTTGGTATAGCATTTTCAAACAAAAGATTCTTA 172574 || |||||| | || ||||| || || ||||| | || ||||| || ||| | ||| Sbjct 26531658 ACCGCTAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTAGGTTA 26531717 Query 172575 CACTTCCTTATGTTGTTCGTACCTGT 172600 || ||| ||||||| | ||||| || Sbjct 26531718 CATTTCTTTATGTTATATGTACCAGT 26531743 Score = 181 bits (200), Expect = 1e-40 Identities = 301/432 (70%), Gaps = 2/432 (0%) Strand=Plus/Plus Query 170714 TTTGGTGTCTTAATGATCCCATGTCTTCTA-ACTGCTGCTGCTTGTTTCATTGTAGCATT 170772 |||||||| || |||||||| | ||| | ||||| || || || ||| |||| || Sbjct 25270610 TTTGGTGTTTTGATGATCCC-TACCTTATTGACTGCAACTTCTGTATTTATTATAGCCTT 25270668 Query 170773 CATCGCTGCTCCTCCAGTCGATATCGACGGAATCAGAGAACCAGTTGCGGGTTCTTTCTT 170832 ||| |||||||||||||| ||||| | || || | |||| ||| | || ||| | | Sbjct 25270669 CATTGCTGCTCCTCCAGTAGATATTAATGGTATTCGCAAACCTGTTTCCGGATCTCTACT 25270728 Query 170833 ATATGGTAACAACATCATCTCTGGTGCTGTAGTTCCATCTTCAAACGCAATAGGATTACA 170892 || || ||||| || || |||||||| | |||| |||| || || || || || Sbjct 25270729 TTACGGAAACAATATTATTTCTGGTGCCATTATTCCTACTTCTGCAGCTATCGGGTTGCA 25270788 Query 170893 CTTCTATCCCATCTGGGAAGCAGCCACTATGGACGAGTGGTTGTACAACGGAGGTCCTTA 170952 ||| ||||| || |||||||| || | | || |||||||| ||||| || |||||||| Sbjct 25270789 CTTTTATCCAATATGGGAAGCGGCATCGGTTGATGAGTGGTTATACAATGGTGGTCCTTA 25270848 Query 170953 CCAGTTAGTTATTTTCCACTTCCTTATTGGAATCTCTGCCTACATGGGTAGACAGTGGGA 171012 || || || || | |||||| | |||| | || | || |||||| | ||||||| Sbjct 25270849 TGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCTTCTTATATGGGTCGTGAGTGGGA 25270908 Query 171013 ACTATCATACAGACTAGGAATGAGACCTTGGATATGTGTAGCATACTCAGCACCTGTATC 171072 ||| | | | || || ||| | |||||||| ||| ||||| ||||| || || Sbjct 25270909 ACTTAGTTTCCGTCTGGGTATGTGCCCTTGGATTGCTGTTGCATATTCAGCTCCGGTTGT 25270968 Query 171073 TGCAGCATTTGCAGTATTCCTTGTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGTAT 171132 || || ||| || ||| | | || ||| | | ||| || || ||||||||||| Sbjct 25270969 AGCGGCTACTGCTGTTTTCTTGATCTACCCAATTGCTCAAGGAAGCTTTTCTGATGGTAT 25271028 Query 171133 GCCACTAGGTAT 171144 ||| ||||| || Sbjct 25271029 GCCTCTAGGAAT 25271040 Score = 113 bits (124), Expect = 5e-20 Identities = 133/180 (74%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 171101 CCATTCGGTCAGGGTTCATTCTCTGATGGTATGCCACTAGGTATCTCAGGTACGTTCAAC 171160 ||| | ||||| || || | |||||||||||| |||| ||||| ||||| |||||| Sbjct 4492375 CCAATTGGTCAAGGAAGCTTTTTTGATGGTATGCCTTTAGGAATCTCTGGTACTTTCAAC 4492434 Query 171161 TTCATGTTCGTGTTCCAAGCAGAACACAACATACTAATGCACCCCTTCCATATGGCAGGT 171220 || ||| | || || || || || |||||||| || |||||||| || || ||| |||| Sbjct 4492435 TTTATGATTGTATTTCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGT 4492494 Query 171221 GTAGCAGGTATGTTCGGTGGTAGTCTCTTCAGTGCAATGCACGGTTCTCTAGTGACATCT 171280 |||| ||| | ||||| || || || ||||| ||||| ||||| | || || ||| Sbjct 4492495 GTAGTTGGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCATGGTTCCTTGGTAACTTCT 4492554 >seq26327 Length=568 Score = 288 bits (318), Expect = 1e-72 Identities = 406/568 (71%), Gaps = 2/568 (0%) Strand=Plus/Minus Query 170714 TTTGGTGTCTTAATGATCCCATGTCTTCTA-ACTGCTGCTGCTTGTTTCATTGTAGCATT 170772 |||||||| || |||||||| | ||| | ||||| || || || ||| |||| || Sbjct 568 TTTGGTGTTTTGATGATCCC-TACCTTATTGACTGCAACTTCTGTATTTATTATAGCCTT 510 Query 170773 CATCGCTGCTCCTCCAGTCGATATCGACGGAATCAGAGAACCAGTTGCGGGTTCTTTCTT 170832 ||| |||||||||||||| ||||| || || || | ||||| ||| | || ||| | | Sbjct 509 CATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGCGAACCTGTTTCCGGATCTCTACT 450 Query 170833 ATATGGTAACAACATCATCTCTGGTGCTGTAGTTCCATCTTCAAACGCAATAGGATTACA 170892 || || ||||| || || |||||||| | |||| |||| || || || || || Sbjct 449 TTACGGAAACAATATTATTTCTGGTGCCATTATTCCTACTTCTGCAGCTATTGGGTTGCA 390 Query 170893 CTTCTATCCCATCTGGGAAGCAGCCACTATGGACGAGTGGTTGTACAACGGAGGTCCTTA 170952 ||| ||||| || |||||||| || | | || |||||||| ||||| || |||||||| Sbjct 389 CTTTTATCCAATATGGGAAGCGGCATCGGTTGATGAGTGGTTATACAATGGTGGTCCTTA 330 Query 170953 CCAGTTAGTTATTTTCCACTTCCTTATTGGAATCTCTGCCTACATGGGTAGACAGTGGGA 171012 || || || || | |||||| | |||| | || || |||||| | ||||||| Sbjct 329 TGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGA 270 Query 171013 ACTATCATACAGACTAGGAATGAGACCTTGGATATGTGTAGCATACTCAGCACCTGTATC 171072 ||| | | | || || ||| | |||||||| ||| ||||| ||||| || || | Sbjct 269 ACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCGGTTGC 210 Query 171073 TGCAGCATTTGCAGTATTCCTTGTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGTAT 171132 || || ||| || ||| | | || ||| | ||||| || || ||||||||||| Sbjct 209 AGCGGCTACTGCTGTTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTAT 150 Query 171133 GCCACTAGGTATCTCAGGTACGTTCAACTTCATGTTCGTGTTCCAAGCAGAACACAACAT 171192 ||| ||||| ||||| ||||| |||||||| ||| | || ||||| || || |||||||| Sbjct 149 GCCTCTAGGAATCTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACAT 90 Query 171193 ACTAATGCACCCCTTCCATATGGCAGGTGTAGCAGGTATGTTCGGTGGTAGTCTCTTCAG 171252 || ||||| || || || ||| ||||||||| ||| | ||||| || || || || Sbjct 89 CCTTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTTAG 30 Query 171253 TGCAATGCACGGTTCTCTAGTGACATCT 171280 ||| ||||| ||||| | || || ||| Sbjct 29 TGCTATGCATGGTTCCTTGGTAACTTCT 2 >seq190 Length=503529 Score = 260 bits (288), Expect = 2e-64 Identities = 381/535 (71%), Gaps = 13/535 (2%) Strand=Plus/Minus Query 171119 TTCTCTGATGGTATGCCACTAGGTATCTCAGGTACGTTCAACTTCATGTTCGTGTTCCAA 171178 || |||||||||||||| |||| | | | |||| |||||||| ||| | || ||||| Sbjct 35701 TTTTCTGATGGTATGCCTCTAGTTCTTT--GGTATTTTCAACTTTATGATTGTATTCCAG 35644 Query 171179 GCAGAACACAACATACTAATGCACCCCTTCCATATGGCAGGTGTAGCAGGTATGTTCGGT 171238 || || || ||||| || ||||||| || || ||| ||||||||| ||| | ||||| Sbjct 35643 GCTGAGCATAACATCCTTGTGCACCCATTTCACATGTTAGGTGTAGCTGGTGTTTTCGGC 35584 Query 171239 GGTAGTCTCTTCAGTGCAATGCACGGTTCTCTAGTGACATCTTCTCTAATCAGAGAGACA 171298 || || || ||||| ||||| ||||| | || || ||| | | |||||||| || Sbjct 35583 GGCTCCCTATTTAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGAGAAACC 35524 Query 171299 ACTGAGAACGAGAGTCAAAACTACGGCTATAAGTTCGGACAAGAAGAAGAAACATATAAC 171358 || | || || | || | || || | ||||| ||||| ||||||| |||| Sbjct 35523 ACATAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAAATTATAT- 35465 Query 171359 ATTGTTGCTGCTCATGGATACTTCGGTAGATTAATCTTCCAGTATGCATCATTCAACAAC 171418 || || || |||||||| || || || |||| |||||||| ||||| |||||||| Sbjct 35464 ATCGTAGCCGCTCATGGTTATTTTCGTCGATTCATCTTCCAATATGCTAGTTTCAACAAT 35405 Query 171419 TCTCGTTCATTACACTTCTTCCTCGCTGTATTCCCTGTAGTCTGTGTATGGTTAACCTCT 171478 |||||||| |||||||| ||| | || | | ||| |||| || | ||| || || Sbjct 35404 TCTCGTTCTTTACACTTATTCTTAGCGGCTTGGCCTATAGTAGGTATTCAGTTTACTGCT 35345 Query 171479 ATGGGTATCTGTACAATGGCATTCAACCTTAACGGATTCAACTTCAACCAATCAGTTGTA 171538 | ||||| |||| ||||| ||||||| || || ||||| ||||||||||| |||| Sbjct 35344 TTAGGTATTAGTACTATGGCTATCAACCTAAATGGTTTCAATTTCAACCAATC---TGTA 35288 Query 171539 GATGCAAACGGAAAGATTGTACCA-----ACATGGGGAGATGTTCTTAACAGAGCAAACC 171593 | | || | | | || || || | || || | ||||| | || |||| Sbjct 35287 GTT--AATAGTCTTGGTCGTGTCATTAATACCTAGGCTTATATCATTAACCGTGCTAACC 35230 Query 171594 TTGGAATGGAAGTTATGCATGAAAGAAATGCACACAACTTCCCACTAGACCTAGC 171648 |||| |||||||||||||||||| | ||||| || |||||||| ||||||||||| Sbjct 35229 TTGGTATGGAAGTTATGCATGAATGTAATGCTCATAACTTCCCTCTAGACCTAGC 35175 >seq3386 Length=956 Score = 194 bits (214), Expect = 2e-44 Identities = 409/607 (67%), Gaps = 5/607 (1%) Strand=Plus/Minus Query 171795 TTTGACGTTCTTGATGATTGGTTAAAGAGAGATCGTTTCGTATTCATCGGATGGTCTGGT 171854 ||||| || | ||||| |||||| ||| || |||||||| || | || ||||| ||| Sbjct 783 TTTGATATTATGGATGACTGGTTACGGAGGGACCGTTTCGTCTTTGTAGGTTGGTCAGGT 724 Query 171855 CTTTTACTTTTACCTTGTGCTTACCTAGCAATCGGAGGTTGGTTCGTAGGAACTACTTTC 171914 || || || || ||||||||||| | || | |||||||||| ||| || || || Sbjct 723 CTATTGCTCTTTCCTTGTGCTTATTTTGCCTTAAGAGGTTGGTTTACAGGTACAACCTTT 664 Query 171915 GTGACCTCATGGTACACACATGGTATTGCATCCTCATATCTTGAGGGAGCAAACTTTTTA 171974 || || |||||||| | ||||| | || | ||| | || || | || ||| Sbjct 663 GTAACTTCATGGTATGCCCATGGATTGGCCAGTTTTTATTTGGAAGGCTGGAGTTTCTTA 604 Query 171975 ACTGCAGCAGTATCAACACCTGGTGATGCTATGGGTCATAGTC--TATTGTTCCTATGGG 172032 ||||||||| || | |||| | || | | | |||| || ||||||| | | || Sbjct 603 CTTGCAGCAGTTTCTCCTCCTGCTAATAGTTT--GACATACTCTTTATTGTTACGCTTGG 546 Query 172033 GACCTGAGGCACAAGGAGATCTTGTACGATGGTTTCAATTAGGTGGACTATGGAACTTTG 172092 | ||||| |||||||| ||| || || | || ||||||||| || || |||| |||| Sbjct 545 GTCCTGAAGCACAAGGTGATTTTACTCGTTAGTGTCAATTAGGCGGCCTGTGGACTTTTG 486 Query 172093 TAGCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTTAGACAGTTTGAGATTGCAG 172152 | || | ||||| | || ||||| |||||||| ||| | | | || || |||| Sbjct 485 TTGCTCTTCATGGTGCTTTCGGACTAATAGGTTTTATGTTACGTAAATTCGAACTTGCTC 426 Query 172153 GACTTGTTGGGATACGTCCTTACAACGCACTAGCATTCTCAGCAGTTATTGCAGTATTCA 172212 || |||| | | ||| | || ||| | ||||| || | ||||| || || Sbjct 425 GATCTGTTCAATTGCTCCCTAATAATGCAATTGCATTATCTGGTCCAATTGCTGTTTTTG 366 Query 172213 CGAGCATCTTTCTAATATATCCATTAGGTCAGCATAGTTGGTTCTTCGCACCTTCATTTG 172272 | || ||||| ||||| |||| ||| | ||| |||||| || | || |||| Sbjct 365 TTTATGTATTCCTAATTAATCCACTAGGCCAGTCTGGTTAGTTCTTTGCGCTTTGTTTTG 306 Query 172273 GTGTCGCAGCAATCTTTCGTTATATTTTATTCATACAGGGTTTCCACAATATAACTCTTA 172332 |||| |||| || |||| | |||| | || | || || || || ||| || || | Sbjct 305 GTGTAGCAGGTATATTTCAAT-TATTCTCTTTTTTCAAGGGTTTCATAATTGGACGCTGA 247 Query 172333 ATCCATTTCATATGATGGGTGTAGCAGGTATACTTGGTGGAGCATTACTATGTGCCATAC 172392 | ||||||||||||||||| || || ||| || | | || || ||||| || || | Sbjct 246 ACCCATTTCATATGATGGGAGTTGCCGGTGTATTGAACGCCGCTTTGCTATGCGCTATTC 187 Query 172393 ATGGTGC 172399 ||||||| Sbjct 186 ATGGTGC 180 >seq13156 Length=742 Score = 179 bits (198), Expect = 4e-40 Identities = 315/459 (69%), Gaps = 0/459 (0%) Strand=Plus/Minus Query 171795 TTTGACGTTCTTGATGATTGGTTAAAGAGAGATCGTTTCGTATTCATCGGATGGTCTGGT 171854 ||||| ||| | ||||| | |||| ||| || |||||||| || | || ||||| ||| Sbjct 459 TTTGATGTTATGGATGACTAGTTACGGAGGGACCGTTTCGTTTTTGTAGGTTGGTCGGGT 400 Query 171855 CTTTTACTTTTACCTTGTGCTTACCTAGCAATCGGAGGTTGGTTCGTAGGAACTACTTTC 171914 || || || || ||||||||||| | || | ||||||||||| || || || || Sbjct 399 CTATTGCTCTTTCCTTGTGCTTATTTTGCCTTAGGAGGTTGGTTTACGGGTACAACCTTT 340 Query 171915 GTGACCTCATGGTACACACATGGTATTGCATCCTCATATCTTGAGGGAGCAAACTTTTTA 171974 || | |||||||| || ||||| || || || ||| || | || || || ||| Sbjct 339 GTAAATTCATGGTATACCCATGGAATGGCCAGTTCTTATTTTTAAGGCTGCAATTTCTTA 280 Query 171975 ACTGCAGCAGTATCAACACCTGGTGATGCTATGGGTCATAGTCTATTGTTCCTATGGGGA 172034 || |||||||| || || ||| | || | | | || | ||||||| || ||||| Sbjct 279 ACCGCAGCAGTTTCTACTCCTTCTAATAGTTTAGCACACTCTTTATTGTTACTCTGGGGT 220 Query 172035 CCTGAGGCACAAGGAGATCTTGTACGATGGTTTCAATTAGGTGGACTATGGAACTTTGTA 172094 | ||| |||||||| ||| || || || | ||||||||| | || |||| ||||| Sbjct 219 CTTGAAGCACAAGGCGATTTTACTCGTTGTTGTCAATTAGGCGTCCTGTGGACTTTTGTT 160 Query 172095 GCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTTAGACAGTTTGAGATTGCAGGA 172154 || | ||||| | || ||||| |||||||| ||| | | || ||||| |||| || Sbjct 159 GCTCTTCATGGTGCTTTCGGACTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGA 100 Query 172155 CTTGTTGGGATACGTCCTTACAACGCACTAGCATTCTCAGCAGTTATTGCAGTATTCACG 172214 |||| | || ||||| || ||| | |||||||| | ||||| || || Sbjct 99 TCTGTTCAATTGCGCCCTTATAATGCAATCGCATTCTCTGGTCCAATTGCTGTTTTTGTT 40 Query 172215 AGCATCTTTCTAATATATCCATTAGGTCAGCATAGTTGG 172253 | || ||||| |||||| |||||||| |||| || Sbjct 39 TCTGTATTCCTAATTTATCCACTAGGTCAGTCTAGTGGG 1 >seq22 Length=40393389 Score = 174 bits (192), Expect = 2e-38 Identities = 240/336 (71%), Gaps = 0/336 (0%) Strand=Plus/Minus Query 171795 TTTGACGTTCTTGATGATTGGTTAAAGAGAGATCGTTTCGTATTCATCGGATGGTCTGGT 171854 ||||| ||| | ||||| |||||| ||| || |||||||| || | || ||||| ||| Sbjct 10849555 TTTGATGTTATGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGTTGGTCGGGT 10849496 Query 171855 CTTTTACTTTTACCTTGTGCTTACCTAGCAATCGGAGGTTGGTTCGTAGGAACTACTTTC 171914 || || || || ||||||||||| | || | ||||||||||| || || || || Sbjct 10849495 CTATTGCTCTTTCCTTGTGCTTATTTTGCCTTAGGAGGTTGGTTTACGGGTACAACCTTT 10849436 Query 171915 GTGACCTCATGGTACACACATGGTATTGCATCCTCATATCTTGAGGGAGCAAACTTTTTA 171974 || || |||||||| || ||||| | || || ||| | || || || || ||| Sbjct 10849435 GTAACTTCATGGTATACCCATGGATTGGCCAGTTCTTATTTGGAAGGCTGCAATTTCTTA 10849376 Query 171975 ACTGCAGCAGTATCAACACCTGGTGATGCTATGGGTCATAGTCTATTGTTCCTATGGGGA 172034 || |||||||| || || |||| | || | | | || | |||| || || ||||| Sbjct 10849375 ACCGCAGCAGTTTCTACTCCTGCTAATAGTTTAGCACACTCTTTATTATTACTCTGGGGT 10849316 Query 172035 CCTGAGGCACAAGGAGATCTTGTACGATGGTTTCAATTAGGTGGACTATGGAACTTTGTA 172094 ||||| |||||||| ||| || || |||| ||||||||| || || |||| ||||| Sbjct 10849315 CCTGAAGCACAAGGCGATTTTACTCGTTGGTGTCAATTAGGCGGCCTGTGGACTTTTGTT 10849256 Query 172095 GCATTACATGGAGTCTTTGGACTCATAGGTTTCATG 172130 || | ||||| | || ||||| |||||||| ||| Sbjct 10849255 GCTCTTCATGGTGCTTTCGGACTAATAGGTTTTATG 10849220 Score = 105 bits (116), Expect = 8e-18 Identities = 233/341 (68%), Gaps = 19/341 (6%) Strand=Plus/Plus Query 171323 GGCTATAAGTTCGGACAAGAAGAAGAAACATATAACATTGTTGCTGCTCATGGATACTTC 171382 || || || |||| ||||| || ||| ||||| || || | || |||| || || Sbjct 6368203 GGTTACAAATTCGATCAAGAGCAAATAACTTATAATATCGTAGTCGCACATGCTTATTTT 6368262 Query 171383 GGTAGA-TTAATCTTCCAGTATGC-AT-CATTCAACAACTCTCGTTCATTACACTTCTTC 171439 ||| || || |||||||| || || || | |||||||| | | ||| |||||||||||| Sbjct 6368263 GGTCGAATTGATCTTCCAATAAGCTATACCTTCAACAATTATGATTCTTTACACTTCTTC 6368322 Query 171440 CTCGCTGTATTCCCTGTA----GTCTGTGTATGGTTAACCTCTATGGGTATCTGTACAAT 171495 | | || | |||||| || || | | ||| ||| || | ||||| |||| || Sbjct 6368323 TTAGTTGCTTGACCTGTATGTAGTAGGTATTTAGTTTACCGCTTTAGGTATTAGTACTAT 6368382 Query 171496 GGCATTCAACCTTAACGGATTCAACTTCAACCAATCAGTTGTAGAT--GCAA--ACGGAA 171551 | ||||| || | || ||||| ||||||||||| || || ||| ||| || Sbjct 6368383 ATCCTTCAATCTAGATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTTT 6368442 Query 171552 AGATTGTACCAACATGGGGAGATGTTCTT---AACAGAGCAAACC-TTGGAATGGAAGTT 171607 | | |||| ||| ||| || || ||| | || |||| |||| ||||||||| Sbjct 6368443 AATTAATACC----TGGCCTGATATTATTATCAACCGTGCGAACCTTTGGTATGGAAGTT 6368498 Query 171608 ATGCATGAAAGAAATGCACACAACTTCCCACTAGACCTAGC 171648 |||| || | |||| || |||||||| ||||||| ||| Sbjct 6368499 GTGCACGATCGTAATGTTCATAACTTCCCCCTAGACCAAGC 6368539 >seq1964 Length=2038 Score = 123 bits (136), Expect = 3e-23 Identities = 185/263 (70%), Gaps = 0/263 (0%) Strand=Plus/Plus Query 171197 ATGCACCCCTTCCATATGGCAGGTGTAGCAGGTATGTTCGGTGGTAGTCTCTTCAGTGCA 171256 ||| |||| || || ||| |||||||| ||| | ||||| || || || |||| Sbjct 542 ATGAACCCATTTCACATGTTAGGTGTAGATGGTGTATTCGGCGGCTTCCTATTTAGTGTT 601 Query 171257 ATGCACGGTTCTCTAGTGACATCTTCTCTAATCAGAGAGACAACTGAGAACGAGAGTCAA 171316 ||| | ||||| | || || ||| | | ||||| || || || || | || | Sbjct 602 ATGTATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAGATGAATCTGCT 661 Query 171317 AACTACGGCTATAAGTTCGGACAAGAAGAAGAAACATATAACATTGTTGCTGCTCATGGA 171376 || | || || | ||||| ||||| |||||||| ||| | ||||| || | |||||| Sbjct 662 AATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACTTATGATATTGTAGCCGTTCATGGT 721 Query 171377 TACTTCGGTAGATTAATCTTCCAGTATGCATCATTCAACAACTCTCGTTCATTACACTTC 171436 || || ||| |||| |||||||| ||||| || ||||| |||| ||| ||||||||| Sbjct 722 TATTTTGGTCGATTGATCTTCCAATATGCTAGTTTAAACAATTCTCATTCTTTACACTTC 781 Query 171437 TTCCTCGCTGTATTCCCTGTAGT 171459 ||| | |||| | |||||||| Sbjct 782 TTCTTAGCTGCTTGGCCTGTAGT 804 >seq295 Length=224868 Score = 118 bits (130), Expect = 1e-21 Identities = 229/337 (68%), Gaps = 1/337 (0%) Strand=Plus/Plus Query 170888 TTACACTTCTATCCCATCTGGGAAGCAGCCACTAT-GGACGAGTGGTTGTACAACGGAGG 170946 |||||||| ||| | || ||||||||||| | || || |||||||| ||||| | || Sbjct 182507 TTACACTTTTATTCAATATGGGAAGCAGCATCGATATGATGAGTGGTTATACAATGCTGG 182566 Query 170947 TCCTTACCAGTTAGTTATTTTCCACTTCCTTATTGGAATCTCTGCCTACATGGGTAGACA 171006 |||||| || || || || | |||||| | |||| | || || ||||| | | Sbjct 182567 TCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAACTTGTTATATGGGCCGTGA 182626 Query 171007 GTGGGAACTATCATACAGACTAGGAATGAGACCTTGGATATGTGTAGCATACTCAGCACC 171066 |||| || | | | ||| | | | |||||||| ||| ||||| ||| | || Sbjct 182627 GTGGAAATTTAGTGTCTGTCTAAGTAATCGCCCTTGGATTGCTGTTGCATATTCACCTCC 182686 Query 171067 TGTATCTGCAGCATTTGCAGTATTCCTTGTGTATCCATTCGGTCAGGGTTCATTCTCTGA 171126 || | || || ||| || ||| | | || ||| | ||||| || || ||| | Sbjct 182687 GGTTGCAGCGGCTACTGCTGTTTTCTTGATTTACCCAATTGGTCAAGGAAGTTTTTCTAA 182746 Query 171127 TGGTATGCCACTAGGTATCTCAGGTACGTTCAACTTCATGTTCGTGTTCCAAGCAGAACA 171186 || ||||| || | ||||| |||| |||||||| ||| | || |||||||| | | Sbjct 182747 TGATATGCTTATAAGAATCTCTTGTACTTTCAACTTTATGATTGTATTCCAAGCTAAGTA 182806 Query 171187 CAACATACTAATGCACCCCTTCCATATGGCAGGTGTA 171223 |||||| || || ||||| || || ||| ||||||| Sbjct 182807 CAACATCCTTATCCACCCATTTCACATGTTAGGTGTA 182843 >seq43 Length=26577699 Score = 116 bits (128), Expect = 4e-21 Identities = 198/285 (69%), Gaps = 3/285 (1%) Strand=Plus/Plus Query 171846 TGGTCTGGTCTTTTACTTTTACCTTGTGCTTACCTAGCAATCGGAGGTTGGTTCGTAGGA 171905 ||||| ||||| || || || ||||||||||| | || | |||||| |||| | || Sbjct 14841956 TGGTCCGGTCTATTGCTCTTTCCTTGTGCTTATTTTGCTTTAGGAGGTCGGTTTATGGGC 14842015 Query 171906 ACTACTTTCGTGACCTCATGGTACACACATGGTATTGCATCCTCATATCTTGAGGGAGCA 171965 || || | ||| | |||||| || ||||| || | |||| ||| | |||| || Sbjct 14842016 ACAACCTCCGTAATTTCATGGCCTACCCATGGAATGACCGCCTCTTATTTGGAGGCTGC- 14842074 Query 171966 AACTTTTTAACTGCAGCAGTATCAACACCTGGTGATGCTATGGGTCATAGTCTATTGTTC 172025 || || ||||| |||||| | || || |||| | || || | || | ||||||| Sbjct 14842075 AATTTCTTAACCGCAGCAATTTCTACTCCTGCTAAT--TAAAGCACACTCTTTATTGTTG 14842132 Query 172026 CTATGGGGACCTGAGGCACAAGGAGATCTTGTACGATGGTTTCAATTAGGTGGACTATGG 172085 || ||||| ||||| |||||||| ||| || || ||| ||||||||| || || || Sbjct 14842133 CTGTGGGGTCCTGAAGCACAAGGTGATTTTACTCGTTGGCATCAATTAGGCGGCCTGCGG 14842192 Query 172086 AACTTTGTAGCATTACATGGAGTCTTTGGACTCATAGGTTTCATG 172130 | ||||| || | ||||| | || ||| ||| |||| ||| Sbjct 14842193 ACTTTTGTTGCTCTTCATGGTGCTTTCAAACTAATAAGTTTTATG 14842237 >seq170 Length=38796167 Score = 113 bits (124), Expect = 5e-20 Identities = 118/155 (76%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 171387 GATTAATCTTCCAGTATGCATCATTCAACAACTCTCGTTCATTACACTTCTTCCTCGCTG 171446 |||| |||||||| ||||| |||||| | |||||||| |||||||||||| | ||| Sbjct 2057926 GATTGATCTTCCAATATGCTAGTTTCAACGATTCTCGTTCTTTACACTTCTTCTTAGCTA 2057985 Query 171447 TATTCCCTGTAGTCTGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAACC 171506 | | |||||| || | ||||| || || | ||||| |||| ||||| ||||||| Sbjct 2057986 CTTGGCTTGTAGTAGGTATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAACC 2058045 Query 171507 TTAACGGATTCAACTTCAACCAATCAGTTGTAGAT 171541 | || || ||||| ||||||||||| || || ||| Sbjct 2058046 TAAATGGTTTCAATTTCAACCAATCTGTAGTTGAT 2058080 Score = 87.8 bits (96), Expect = 2e-12 Identities = 123/171 (72%), Gaps = 9/171 (5%) Strand=Plus/Plus Query 171482 GGTATCTGTACAATGGCATTCAACCTTAACGGATTCAACTTCAACCAATCAGTTGTAGAT 171541 ||||| ||| ||||| |||||||| || || ||||| ||||||||||| || || ||| Sbjct 32379331 GGTATTAGTATTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGAT 32379390 Query 171542 GCAAACGGAAAGATTGT---ACCAACATG-GGGAGATGTTCTTAACAGAGCAAACCTTGG 171597 | ||||| || | || | ||| ||| | ||||| || |||| ||| Sbjct 32379391 A-----GTCAAGATCGTGTAATTAATACCTGGGTGATATCATTAACCATGCTAACCATGG 32379445 Query 171598 AATGGAAGTTATGCATGAAAGAAATGCACACAACTTCCCACTAGACCTAGC 171648 | ||||||||||||||| ||||| || |||||||| ||||||||||| Sbjct 32379446 TGTCGAAGTTATGCATGAACACAATGCTCATAACTTCCCTCTAGACCTAGC 32379496 Score = 82.4 bits (90), Expect = 9e-11 Identities = 60/70 (86%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 171579 TTAACAGAGCAAACCTTGGAATGGAAGTTATGCATGAAAGAAATGCACACAACTTCCCAC 171638 ||||| | || ||| |||| |||||||||||||||||| | ||||| || |||||||| | Sbjct 38011045 TTAACCGTGCTAACTTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTC 38010986 Query 171639 TAGACCTAGC 171648 |||||||||| Sbjct 38010985 TAGACCTAGC 38010976 >seq78 Length=351264 Score = 111 bits (122), Expect = 2e-19 Identities = 136/186 (73%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 172221 TTTCTAATATATCCATTAGGTCAGCATAGTTGGTTCTTCGCACCTTCATTTGGTGTCGCA 172280 || ||||| |||||| |||||||| | |||||||||| || ||| |||||||| ||| Sbjct 238348 TTCCTAATTTATCCACTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCA 238407 Query 172281 GCAATCTTTCGTTATATTTTATTCATACAGGGTTTCCACAATATAACTCTTAATCCATTT 172340 || || ||||| | ||| | || | || || || || ||| || || || |||||| Sbjct 238408 GCTATATTTCGATTCATTCTCTTTTTTCAAGGGTTTCATAATTGGACGCTGAACCCATTT 238467 Query 172341 CATATGATGGGTGTAGCAGGTATACTTGGTGGAGCATTACTATGTGCCATACATGGTGCA 172400 ||||||||||| || || ||| || | || | || | ||||| || | |||||||| Sbjct 238468 CATATGATGGGAGTTGCCGGTGTATTAGGCGCCGCTCTGCTATGCGCTAGTCATGGTGCT 238527 Query 172401 ACAGTA 172406 || ||| Sbjct 238528 ACGGTA 238533 >seq50 Length=1444883 Score = 107 bits (118), Expect = 2e-18 Identities = 158/221 (71%), Gaps = 2/221 (1%) Strand=Plus/Plus Query 170714 TTTGGTGTCTTAATGATCCCATGTCTTCTA-ACTGCTGCTGCTTGTTTCATTGTAGCATT 170772 |||||||| || |||||||| | ||| | ||||| | || || ||| |||| || Sbjct 509072 TTTGGTGTTTTGATGATCCC-TACCTTATTGACTGCAAATTCTGTATTTATTATAGCCTT 509130 Query 170773 CATCGCTGCTCCTCCAGTCGATATCGACGGAATCAGAGAACCAGTTGCGGGTTCTTTCTT 170832 ||| |||||||||||||| ||||| || || || | ||||| ||| | || ||| | | Sbjct 509131 CATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGCGAACCTGTTTCCGGATCTCTACT 509190 Query 170833 ATATGGTAACAACATCATCTCTGGTGCTGTAGTTCCATCTTCAAACGCAATAGGATTACA 170892 || || ||||| || || |||||||| | |||| |||| || || || || || Sbjct 509191 TTACGGAAACAATATTATTTCTGGTGCCATTATTCCTACTTCTGCAGCTATTGGGTTGCA 509250 Query 170893 CTTCTATCCCATCTGGGAAGCAGCCACTATGGACGAGTGGT 170933 ||| ||||| || |||||||| || | | || ||||||| Sbjct 509251 CTTTTATCCAATATGGGAAGCGGCATCGGTTGATGAGTGGT 509291 >seq126 Length=369524 Score = 105 bits (116), Expect = 8e-18 Identities = 114/151 (75%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 171392 ATCTTCCAGTATGCATCATTCAACAACTCTCGTTCATTACACTTCTTCCTCGCTGTATTC 171451 |||||||| ||||| |||||||| |||||||| |||||||||||| | |||| | Sbjct 171132 ATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACACTTCTTCTTAGCTGCTTGA 171191 Query 171452 CCTGTAGTCTGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAACCTTAAC 171511 |||||||| || | ||||| || | ||||| |||| ||||| ||||| || || Sbjct 171192 CCTGTAGTAGGTATTTGGTTTTTTGCTTTAGGTATTAGTACTATGGCTTTCAATCTAAAT 171251 Query 171512 GGATTCAACTTCAACCAATCAGTTGTAGATG 171542 || ||||| ||||||||||| | || |||| Sbjct 171252 GGTTTCAATTTCAACCAATCTATAGTTGATG 171282 >seq57 Length=33024243 Score = 95.1 bits (104), Expect = 1e-14 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 171332 TTCGGACAAGAAGAAGAAACATATAACATTGTTGCTGCTCATGGATACTTCGGTAGATTA 171391 || || ||||| |||||||| ||||| | || || ||||||| || || | |||| Sbjct 2481616 TTTGGTCAAGAGGAAGAAACTTATAATTTCGTAGCCACTCATGGTTATTTTCGCCGATTG 2481675 Query 171392 ATCTTCCAGTATGCATCATTCAACAACTCTCGTTCATTACACTTCTTCCTCGCTGTATTC 171451 |||||||| ||||| |||||||| |||||||| |||||||||||| | |||| | Sbjct 2481676 ATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACACTTCTTCTTAGCTGCTTCG 2481735 Query 171452 CCTGTAGTCTGTGTATGGTTAACCTCTATGGGTAT 171486 ||| |||| | | ||||| || || | ||||| Sbjct 2481736 CCTTTAGTAGGCATTTGGTTTACTGCTTTAGGTAT 2481770 >seq252 Length=353890 Score = 93.3 bits (102), Expect = 5e-14 Identities = 92/118 (78%), Gaps = 1/118 (1%) Strand=Plus/Minus Query 171123 CTGATGGTATGCCACTAGGTATCTCAGGTACGTTCAACTTCATGTTCGTGTTCCAAGCAG 171182 ||||||||||||| ||||| |||| ||||| |||||||| ||| | || ||| | || | Sbjct 38983 CTGATGGTATGCCTCTAGGAATCTTTGGTACTTTCAACTTTATGATTGTATTCTAGGCTG 38924 Query 171183 AACACAACATACTAATGCACCCCTTCCATATGGCAGGTGTAGCAGGTATGTTCGGTGG 171240 | |||||||| || ||||||| || || ||| ||||| ||| ||| | ||| |||| Sbjct 38923 AGCACAACATCCTTATGCACCAATTTCACATGTTAGGTGCAGCTGGTGT-TTCAGTGG 38867 >seq112 Length=888412 Score = 84.2 bits (92), Expect = 2e-11 Identities = 124/176 (70%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 172251 TGGTTCTTCGCACCTTCATTTGGTGTCGCAGCAATCTTTCGTTATATTTTATTCATACAG 172310 |||||||| || ||| |||||| | ||| | || ||||| | ||| | || | || Sbjct 789044 TGGTTCTTTGCGCCTAGTTTTGGTTTAGCATCTATATTTCGATTCATTCTCTTTTTTCAA 788985 Query 172311 GGTTTCCACAATATAACTCTTAATCCATTTCATATGATGGGTGTAGCAGGTATACTTGGT 172370 || || || ||| || || || ||||||||||||||||| || || ||| || | || Sbjct 788984 GGGTTTCATAATTGGACGCTGAACCCATTTCATATGATGGGAGTTGCCGGTGTATTGGGC 788925 Query 172371 GGAGCATTACTATGTGCCATACATGGTGCAACAGTACAGAACACATTGTATGAAGA 172426 | || | |||||||| | ||||||| ||| || | || || || | |||||| Sbjct 788924 GCTGCTCTGCTATGTGCTGTTTATGGTGCTACAATAAAAAATACTTTATTTGAAGA 788869 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 569981912023440