Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Beta_20vulgaris_20subsp._20vulgaris_20[refseq_20GCF_5F000511025.2_20 2015-07-07] 40,246 sequences; 566,550,431 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq127 96.9 4e-15 >seq127 Length=60962716 Score = 96.9 bits (106), Expect = 4e-15 Identities = 114/152 (75%), Gaps = 2/152 (1%) Strand=Plus/Plus Query 21473 AAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTT 21532 ||||| |||||||||||||| | ||||| || | | || |||||||| ||||| ||| Sbjct 5746933 AAACAAGCAAAATCACAATGAAGTCCTTCGTCTCGAGAGATCAATTCATTCGAAAACGTT 5746992 Query 21533 AAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCA-AATGCTCCTGAAAA 21591 ||||| ||||||| || | ||| || | |||||| || || ||| || |||||| || Sbjct 5746993 AAACCCGGCATTAGCCCACGCTTCTTAAGCCAAAAAATGGA-GCAGAAACTTCCTGAGAA 5747051 Query 21592 GAAAATGCCCTCAACGGCAGCAAATGCAACTA 21623 ||| || || |||| |||||| |||| || Sbjct 5747052 GAATATCCCTTCAATACAAGCAAACGCAATTA 5747083 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531633214005040