Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Beta_20vulgaris_20subsp._20vulgaris_20[refseq_20GCF_5F000511025.2_20 2015-07-07] 40,246 sequences; 566,550,431 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq11185 140 2e-28 seq1868 131 1e-25 seq34927 127 1e-24 seq344 127 1e-24 seq103 127 1e-24 seq57 127 1e-24 seq146 118 7e-22 seq58 116 2e-21 seq1 109 4e-19 seq1036 107 1e-18 seq33746 105 4e-18 seq26561 105 4e-18 seq19492 104 2e-17 seq808 102 5e-17 seq157 102 5e-17 seq170 95.1 8e-15 seq35011 93.3 3e-14 seq15933 93.3 3e-14 seq7689 93.3 3e-14 seq20128 91.5 1e-13 seq36963 87.8 1e-12 seq5109 87.8 1e-12 seq147 84.2 1e-11 >seq11185 Length=774 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 728 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 669 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 668 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 634 >seq1868 Length=3818 Score = 131 bits (144), Expect = 1e-25 Identities = 86/95 (91%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| ||||||||| |||| || |||||||| Sbjct 3651 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGAAAGGGACAGTGGGAATCTCGT 3710 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 3711 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 3745 >seq34927 Length=1620 Score = 127 bits (140), Expect = 1e-24 Identities = 85/95 (89%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||| |||||||||||| ||||||||| |||| || |||||||| Sbjct 99 AAGCCCGTTCCCTTGGATGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGT 40 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 39 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 5 >seq344 Length=88605 Score = 127 bits (140), Expect = 1e-24 Identities = 85/95 (89%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 || |||||||||||||||||||||||||| ||||||||| |||| || |||||||| Sbjct 26107 AAACCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGT 26048 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 26047 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 26013 Score = 122 bits (134), Expect = 6e-23 Identities = 84/95 (88%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| || |||||| |||| || |||||||| Sbjct 6452 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGAAAGTAGACAGGGACAGTGGGAATCTCGT 6393 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 ||||| |||||||||||||||||||||||||||| Sbjct 6392 TAATCAATTCATGCGCGTCACTAATTAGATGACGA 6358 >seq103 Length=1049538 Score = 127 bits (140), Expect = 1e-24 Identities = 85/95 (89%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||| |||||||||||||||||||||||| ||||||||| |||| || |||||||| Sbjct 734336 AAGCACGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGT 734277 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 734276 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 734242 >seq57 Length=33024243 Score = 127 bits (140), Expect = 1e-24 Identities = 168/233 (72%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149 ||||||||||| ||| | || | |||||||| ||| || || || |||||||||| Sbjct 18658231 ACCACCTCTCAGACGAAGAACAAGGTGAAGAGTCGACTCTTTCTGGATGTTGTAATCAGC 18658290 Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209 | || | || || | |||||||||||| || || || |||||||| || | || Sbjct 18658291 AAGTGTGCGACCATCTTCAAGTTGTTTTCCGGCGAAAATCAGACGTTGTTGGTCTGGTGG 18658350 Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269 | |||||||||||| || ||| |||||||| | || || || ||| || Sbjct 18658351 AATGCCTTCTTTGTCTTGGATCTTTGCTTTCACATTGTCGATGGTGTCGGAGGATTCGAC 18658410 Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTTTT 38322 ||||| || || ||||||||||| | |||||||||||| |||||||| |||| Sbjct 18658411 TTCTAGGGTTATGGTTTTACCCGTTAGGGTTTTCACGAAGATCTGCATCTTTT 18658463 Score = 84.2 bits (92), Expect = 1e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| || |||| ||||||| ||||||||| |||||||||||||||||||||||| | Sbjct 27223701 CTCTCTTTTTCAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCTC 27223642 Query 20007 GGTAATATTTAGCCTT 20022 | |||||||| || Sbjct 27223641 GCCCGTATTTAGCTTT 27223626 >seq146 Length=1334862 Score = 118 bits (130), Expect = 7e-22 Identities = 169/237 (71%), Gaps = 2/237 (1%) Strand=Plus/Minus Query 38083 AATCAT--TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATT 38140 |||||| ||||||| | | | | |||||| ||||| || || || ||||| || Sbjct 1120105 AATCATCGTACCACCACGAAGCCTTAGCACCAAGTGAAGCGTTGATTCTTTCTGAATGTT 1120046 Query 38141 GTAATCAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTG 38200 |||||| | | | | | | || || |||||||||||||| || || ||||||||||| Sbjct 1120045 GTAATCTGCGAGAGTTCTTCCATCTTCCAATTGTTTTCCGGCGAAAATCAGGCGTTGTTG 1119986 Query 38201 ATCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCC 38260 ||| | || | ||||||||||| || ||| ||||| || | || ||||| Sbjct 1119985 ATCTGGTGGAATTCCTTCTTTGTCTTGGATCTTTGTTTTCACGTTGTCGATTGTATCGGA 1119926 Query 38261 ACTTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | ||| ||||||| || || ||||| || || | |||||||||||| |||||||| Sbjct 1119925 AGATTCCACTTCTAGGGTTATGGTTTTTCCAGTTAGGGTTTTCACGAAAATCTGCAT 1119869 >seq58 Length=2649046 Score = 116 bits (128), Expect = 2e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| |||||||| | ||||||||||||||| |||||| || || ||||| |||| Sbjct 1147383 TACCACCCCTCAAACGAAGCACCAAATGAAGAGTAGACTCCTTCTGGATGTTGTAGTCAG 1147324 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 |||| | | | || || | || || || || || || | | || ||||| | || Sbjct 1147323 CCAAAGTCCTTCCATCCTCAAGCTGCTTACCAGCGAAGATCAACCTCTGCTGATCTGGGG 1147264 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | ||||| || ||| ||||| ||| ||||| | || |||||| ||| || | Sbjct 1147263 GAATACCTTCCTTATCCTGGATTTTCGCCTTGACATTGTCGATAGTATCGGAACTCTCCA 1147204 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || || || ||||| || || ||||| || || || || |||||||| Sbjct 1147203 CCTCCAAGGTGATAGTCTTGCCAGTCAATGTCTTGACAAAAATCTGCAT 1147155 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||| ||||| ||||| | || | ||| ||||| ||||||||| || ||||| || | Sbjct 1146699 TACCTCCTCTTAAACGGAGGACAAGATGGAGAGTTGACTCCTTTTGGATGTTGTAGTCGG 1146640 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | || |||| || | ||||||||||||||| |||| ||||||||||| | | Sbjct 1146639 CGAGAGTTCGGCCGTCTTCAAGTTGTTTTCCGGCAAAGATTAAACGTTGTTGATCTGGAG 1146580 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | ||||| ||||| || ||| ||| || || | || || || ||| |||| Sbjct 1146579 GAATTCCTTCCTTGTCTTGGATCTTTGCCTTTACGTTGTCGATGGTGTCGGAACTCTCAA 1146520 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || | || || || || || || | |||||||||||| || ||||| Sbjct 1146519 CCTCGAGAGTTATGGTCTTGCCGGTAAGGGTTTTCACGAAGATTTGCAT 1146471 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||| || |||||||| | ||||||||||| ||| ||||| || ||||||||||||| Sbjct 1147155 TACCTCCCCTCAAACGGAGAACCAAATGAAGGGTGGATTCCTTCTGGATATTGTAATCAG 1147096 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 |||| ||| | || || | || || || ||||| || | | || || || | | Sbjct 1147095 CCAAAGTACGGCCATCTTCGAGCTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGAG 1147036 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | ||||| |||||| ||| || ||| ||||| | || ||||| ||||||| Sbjct 1147035 GAATACCTTCCTTGTCCTGAATCTTAGCCTTAACATTGTCGATCGTATCCGAGCTTTCAA 1146976 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 |||| || ||||| || || || || | || ||||| || || ||||| Sbjct 1146975 CTTCCAAAGTAATCGTCTTCCCGGTGAGAGTCTTCACAAAGATTTGCAT 1146927 Score = 89.7 bits (98), Expect = 3e-13 Identities = 162/233 (70%), Gaps = 3/233 (1%) Strand=Plus/Minus Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145 |||| || || |||||||| | |||||| ||||| || ||||||||| |||||||||| Sbjct 1147613 CATT-CCTCCCCTCAAACGAAGCACCAAGTGAAGGGTAGACTCCTTTTGGATATTGTAAT 1147555 Query 38146 CAGACAAAACACGT-TCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCG 38204 | | ||| | | | | || || | || || || ||||| || | | || || || Sbjct 1147554 CCG-CAAGAGTCCTCCCATCCTCAAGCTGCTTACCAGCAAAAATCAACCTCTGCTGGTCT 1147496 Query 38205 GAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTT 38264 | ||| | || || || ||| || ||| ||| ||||| | || || || || Sbjct 1147495 GGGGGAATACCCTCCTTATCCTGGATCTTTGCCTTGACATTGTCGATCGTGTCCGAGCTC 1147436 Query 38265 TCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 ||||| || || || || || || || |||||||| ||||| || |||||||| Sbjct 1147435 TCAACCTCCAAAGTGATGGTCTTCCCGGTCAAGGTCTTCACAAAAATCTGCAT 1147383 Score = 84.2 bits (92), Expect = 1e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| || | ||| | ||| | || ||||| |||||| || ||||||||||| | Sbjct 1146927 TACCACCCCTAAGACGGAGCACAAGGTGGAGAGTTGACTCCTTCTGGATATTGTAATCGG 1146868 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | || |||| || | || ||||| || || || || | ||| || || | | Sbjct 1146867 CGAGGGTTCGCCCGTCTTCGAGCTGCTTTCCAGCGAAGATCAGCCTTTGCTGGTCTGGTG 1146808 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | |||||| ||||| |||||| || || || | || |||||| |||||| | Sbjct 1146807 GAATGCCTTCCTTGTCTTGAATTTTGGCTTTGACGTTGTCGATAGTATCGGAACTTTCGA 1146748 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 |||| | || || || || || || | || || ||||| |||||||| Sbjct 1146747 CTTCAAGGGTGATTGTCTTGCCAGTAAGAGTCTTGACGAAGATCTGCAT 1146699 >seq1 Length=34941034 Score = 109 bits (120), Expect = 4e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 || || |||||||| | |||| || | |||| |||||| || || |||||||||| | Sbjct 3650246 CCTCCCCTCAAACGAAGAACCAGGTGCAAAGTGGACTCCTTCTGGATGTTGTAATCAGCC 3650187 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 || | | || || | ||||| |||||||| || || | ||||| || | || Sbjct 3650186 AATGTCCTGCCATCCTCAAGCTGTTTACCGGCAAAGATGAGTCTCTGTTGGTCAGCTGGA 3650127 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | |||||| ||||| |||| || ||||||||| | | |||||| ||||||||| Sbjct 3650126 ATGCCTTCCTTGTCTGTAATCTTCGCCTTCACATTGTCAATGGTATCTGAGCTTTCAACT 3650067 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 || | ||| || || || || || | || ||||| || ||||||||| Sbjct 3650066 TCCAGTGTGATGGTCTTGCCAGTAAGAGTCTTCACAAAGATCTGCATG 3650019 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| || || || | ||||| || || ||| ||||||||| || |||||||| | Sbjct 3649792 TACCACCCCTTAAGCGGAGAACCAAGTGGAGGGTGGACTCCTTTTGGATGTTGTAATCTG 3649733 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | || | || || ||||| ||||||||||| || || | ||| || || | | Sbjct 3649732 CTAGAGTCCGACCATCTTCCAATTGCTTTCCGGCAAAGATAAGCCTTTGCTGGTCTGGTG 3649673 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| || || || || |||||||| ||| ||||| | | ||| ||| ||||| | Sbjct 3649672 GGATACCCTCCTTATCAGTAATTTTTGTCTTAACATTGTCAATAGTGTCTGAGCTTTCGA 3649613 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 | || | || || || || || || | ||| || || || ||||||||| Sbjct 3649612 CCTCAAGGGTGATGGTCTTGCCAGTAAGGGTCTTGACAAAGATCTGCATG 3649563 Score = 96.9 bits (106), Expect = 2e-15 Identities = 163/236 (69%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 38082 CAATCATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTG 38141 ||| ||| |||||| | | ||| | || | ||||| || |||||| ||||||||| Sbjct 3650711 CAAGCATCACCACCGCGAAGACGAAGGACAAGGTGAAGGGTCGACTCCTTCTGAATATTG 3650652 Query 38142 TAATCAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGA 38201 ||||| | || | || | || || || || || || ||||| || || | || ||| Sbjct 3650651 TAATCTGCCAGAGTTCGCCCATCCTCCAACTGCTTCCCAGCAAAGATGAGTCTCTGCTGA 3650592 Query 38202 TCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCA 38261 || | |||| ||||| |||||| ||| || ||||||||| | | ||||| | Sbjct 3650591 TCTGGAGGGATACCTTCCTTGTCCTGAATCTTGGTCTTCACATTATCAATTGTATCAGAA 3650532 Query 38262 CTTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || || || || | || ||||| || || || | ||| ||||| || |||||||| Sbjct 3650531 CTCTCCACCTCAAGGGTGATAGTCTTCCCAGTGAGGGTCTTCACAAAGATCTGCAT 3650476 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||| || | ||| | |||||||||||||| |||||||| || ||||| || | Sbjct 3649562 CCACCCCTGAGACGAAGAACCAAATGAAGAGTTGATTCCTTTTGGATGTTGTAGTCTGCT 3649503 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 || | | | || || | |||||| || ||||| || || | || ||||| | || Sbjct 3649502 AACGTCCTTCCATCCTCCAGTTGTTTCCCAGCAAAGATCAGCCTCTGCTGATCTGGTGGA 3649443 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | || || |||||| || || ||| ||||| | || || ||| || || ||| Sbjct 3649442 ATCCCCTCCTTGTCCTGGATCTTGGTCTTGACATTATCGATTGTGTCTGAGCTCTCGACT 3649383 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || | |||||||| || || || | |||||||| || || ||||| Sbjct 3649382 TCGAGAGTAATAGTCTTTCCGGTGAGAGTTTTCACAAAGATTTGCAT 3649336 >seq1036 Length=7046 Score = 107 bits (118), Expect = 1e-18 Identities = 70/77 (91%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| Sbjct 1045 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTGCGCTATCGGACTCGT 1104 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 1105 GTCTGTATTTAGCCTTA 1121 >seq33746 Length=501 Score = 105 bits (116), Expect = 4e-18 Identities = 69/76 (91%), Gaps = 5/76 (7%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 76 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 17 Query 25957 TAATCCTTTCATGCGC 25972 |||||| ||||||||| Sbjct 16 TAATCCATTCATGCGC 1 >seq26561 Length=560 Score = 105 bits (116), Expect = 4e-18 Identities = 84/100 (84%), Gaps = 11/100 (11%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGAT--------AGTAG--ATAGGGGGTAAT 25951 |||||||||||||||||||| | |||||||||| ||||| | || ||| ||| Sbjct 106 AAGCCCGTTCCCTTGGCTGTTGGTTCGCTAGATTAGACAAAAGTAGGGACAGTGGG-AAT 48 Query 25952 CTCGTTAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 ||||||||||| |||||||||||||||||||||||||||| Sbjct 47 CTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGA 8 >seq19492 Length=646 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||||||||||| |||||| |||| ||||||||||||||||||| || | Sbjct 616 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCTTCACAGTACTTGTTCGCTATCGGTTTCCC 557 Query 20007 GGTAATATTTAGCCTTA 20023 ||||||||||||||| Sbjct 556 ATTAATATTTAGCCTTA 540 >seq808 Length=9131 Score = 102 bits (112), Expect = 5e-17 Identities = 68/76 (89%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| | Sbjct 7279 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCCC 7220 Query 20007 GGTAATATTTAGCCTT 20022 ||||||||| || Sbjct 7219 ACAGATATTTAGCTTT 7204 >seq157 Length=426068 Score = 102 bits (112), Expect = 5e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | | ||| | || |||||||| || ||||||||| ||||||||||| | Sbjct 398513 TACCACCACGAAGACGAAGGACTAAATGAAGGGTAGACTCCTTTTGGATATTGTAATCTG 398454 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 |||| ||| | || || | ||| || |||||||| || || | |||||||| | | Sbjct 398453 CCAAAGTACGACCATCCTCAAGTTGCTTACCGGCAAAGATGAGCCTCTGTTGATCTGGTG 398394 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| ||||| ||||| || || ||||||||| | | ||||| || |||| Sbjct 398393 GGATACCTTCCTTGTCTTGTATCTTAGCCTTCACATTGTCAATCGTATCAGAGCTCTCAA 398334 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || || ||||| || || || || | || || || || || ||||| Sbjct 398333 CCTCCAAAGTAATGGTCTTTCCAGTGAGAGTCTTGACAAAGATTTGCAT 398285 Score = 89.7 bits (98), Expect = 3e-13 Identities = 146/208 (70%), Gaps = 8/208 (4%) Strand=Plus/Minus Query 38114 ATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCG----TCGTCTA 38169 |||||| || |||||| |||||||||||||||| ||| ||||| || || | Sbjct 398032 ATGAAGGGTTGACTCCTTCTGAATATTGTAATCAG-CAA---GGGTTCGGCCATCTTCGA 397977 Query 38170 ATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAA 38229 ||| || |||||||| || || ||||| || || | || | ||| || ||||| || Sbjct 397976 GTTGCTTACCGGCAAAGATCAGACGTTGCTGGTCAGGAGGAATGCCCTCCTTGTCTTGAA 397917 Query 38230 TTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTAC 38289 | ||| ||| ||||| | | ||||| ||| || || || | || || || |||| Sbjct 397916 TCTTTGCCTTAACATTGTCAATTGTATCAGAACTCTCCACCTCGAGAGTGATCGTCTTAC 397857 Query 38290 CCGTCAAGGTTTTCACGAATATCTGCAT 38317 | |||||||| || || || || ||||| Sbjct 397856 CAGTCAAGGTCTTAACAAAGATTTGCAT 397829 >seq170 Length=38796167 Score = 95.1 bits (104), Expect = 8e-15 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 38106 AACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCG 38165 |||||||||||||| | || || ||||| |||||||| | | | | | || Sbjct 3261153 AACACCAAATGAAGCTTCAATTCTTTCTGAATGTTGTAATCTACGAGAGTTCTTCCATCT 3261212 Query 38166 TCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCC 38225 || |||||||||| ||| || || |||||||||||||| | | | ||||| ||||| Sbjct 3261213 TCCAATTGTTTTCTGGCGAAAATCAGGCGTTGTTGATCTGGTGAAATTCCTTCCTTGTCT 3261272 Query 38226 ATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTT 38285 || ||| ||||| || | || |||| | ||| ||||||| || || ||| Sbjct 3261273 TGGATCTTTGTTTTCACGTTGTCGATTATATCGAAAGATTCGACTTCTAGGGTTATGGTT 3261332 Query 38286 TTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320 || | || | |||||||||||| |||||||| || Sbjct 3261333 TTTCTAGTTACGGTTTTCACGAAAATCTGCATTTT 3261367 >seq35011 Length=1599 Score = 93.3 bits (102), Expect = 3e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||||| ||||||||| ||||||||||||| |||||||||| | Sbjct 584 CTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTCGATATCGGTCTCTC 643 Query 20007 GGTAATATTTAGCCTT 20022 | ||||||||||| Sbjct 644 GCCCGTATTTAGCCTT 659 >seq15933 Length=696 Score = 93.3 bits (102), Expect = 3e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||||| ||||||||| ||||||||||||||||||||||| | Sbjct 456 CTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTTTC 515 Query 20007 GGTAATATTTAGCCTT 20022 | ||||||||||| Sbjct 516 GCCCGTATTTAGCCTT 531 >seq7689 Length=845 Score = 93.3 bits (102), Expect = 3e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||||| ||||||||| ||||||||||||||||||||||| | Sbjct 255 CTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTTTC 196 Query 20007 GGTAATATTTAGCCTT 20022 | ||||||||||| Sbjct 195 GCCCGTATTTAGCCTT 180 >seq20128 Length=639 Score = 91.5 bits (100), Expect = 1e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 19948 TCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCG 20007 ||||| |||||||| ||||||| ||||||||| |||||||||||||||||||||||| | Sbjct 612 TCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCTTG 553 Query 20008 GTAATATTTAGCCTT 20022 ||||||||||| Sbjct 552 CCCGTATTTAGCCTT 538 >seq36963 Length=1246 Score = 87.8 bits (96), Expect = 1e-12 Identities = 70/84 (83%), Gaps = 3/84 (4%) Strand=Plus/Minus Query 19943 ATTTCTCTC---TCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCG 19999 ||||| ||| | |||| |||||||||| ||||||||||||||||| |||| |||||| Sbjct 568 ATTTCACTCCGTTATTCACGGTTCTTTTCACCTTTCCCTCACGGTACTGGTTCACTATCG 509 Query 20000 GTCTCGCGGTAATATTTAGCCTTA 20023 ||||| | | | |||||||||||| Sbjct 508 GTCTCTCAGGAGTATTTAGCCTTA 485 >seq5109 Length=906 Score = 87.8 bits (96), Expect = 1e-12 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| |||||| ||||||||| ||||||||||||||||||||||| | Sbjct 568 CTCTCTTTTCAAAGTCATTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTTTC 627 Query 20007 GGTAATATTTAGCCTT 20022 | ||||||||||| Sbjct 628 GCCCGTATTTAGCCTT 643 >seq147 Length=783512 Score = 84.2 bits (92), Expect = 1e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| || |||| ||||||| ||||||||| |||||||||||||||||||||||| | Sbjct 701060 CTCTCTTTTTCAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCTC 701001 Query 20007 GGTAATATTTAGCCTT 20022 | |||||||| || Sbjct 701000 GCCCGTATTTAGCTTT 700985 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334782909026426