Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Beta_20vulgaris_20subsp._20vulgaris_20[refseq_20GCF_5F000511025.2_20 2015-07-07] 40,246 sequences; 566,550,431 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq127 87.8 2e-12 >seq127 Length=60962716 Score = 87.8 bits (96), Expect = 2e-12 Identities = 99/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 116425 GGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATA 116484 ||||| || || ||||||||||||||||||| || || | |||||||| ||| Sbjct 7119255 GGAAGAGCAATAGACGCCAGATTACACACAGCAGTTTCTGTTGGACTGGTGTACTCAATA 7119314 Query 116485 ATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG 116544 || || ||||||||||||||| |||||| || || | ||||| ||||| ||| | Sbjct 7119315 ATCTCAGTACACAAATTTGAAGACTTAATTGTACCAAGGTTCTGCTGATTGCTCTTCCGG 7119374 Query 116545 TTACACGCATCCT 116557 ||||| | ||||| Sbjct 7119375 TTACAGGAATCCT 7119387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613198559865360