Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Beta_20vulgaris_20subsp._20vulgaris_20[refseq_20GCF_5F000511025.2_20 2015-07-07] 40,246 sequences; 566,550,431 total letters Query= NC_014461.1 Length=73453 Score E Sequences producing significant alignments: (Bits) Value seq2434 84.2 1e-11 seq31752 82.4 4e-11 >seq2434 Length=987 Score = 84.2 bits (92), Expect = 1e-11 Identities = 57/64 (89%), Gaps = 0/64 (0%) Strand=Plus/Minus Query 61303 CGTTAGCTCAGTTGGTAGAGCTGCCGACTCTTAATCGGTAGGTCGCAGGTTCAAATCCTG 61362 ||||||||||||||||||||| || |||| |||||| || |||||||||||| ||||| | Sbjct 199 CGTTAGCTCAGTTGGTAGAGCAGCGGACTTTTAATCCGTTGGTCGCAGGTTCGAATCCCG 140 Query 61363 CACG 61366 |||| Sbjct 139 CACG 136 >seq31752 Length=516 Score = 82.4 bits (90), Expect = 4e-11 Identities = 60/70 (86%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 63232 CCCCCAGCAGGACTCGAACCTGCGACCTGTCGCTTAAAAGGCGATAGCTCTACCAACTGA 63291 ||||| ||||||||||||||||||||| | || |||| || || |||||||||||||| Sbjct 378 CCCCCCGCAGGACTCGAACCTGCGACCCGGCGGTTAACAGCCGCCTGCTCTACCAACTGA 437 Query 63292 GCTATAGGGG 63301 |||| ||||| Sbjct 438 GCTAGAGGGG 447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 234809569826084