Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Beta_20vulgaris_20subsp._20vulgaris_20[refseq_20GCF_5F000511025.2_20 2015-07-07] 40,246 sequences; 566,550,431 total letters Query= NC_014636.1 Length=225268 Score E Sequences producing significant alignments: (Bits) Value seq18684 96.9 5e-15 seq9101 86.0 9e-12 >seq18684 Length=643 Score = 96.9 bits (106), Expect = 5e-15 Identities = 70/81 (86%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 189966 TGCGGATGGTCGGACTCGAACCGACACGCCTATGGCGCTAGAACCTAAATCTAGTGCGTC 190025 ||||| ||| ||||| ||||| ||||||| ||||| ||||||||||||| ||||||| Sbjct 404 TGCGGGTGGAGGGACTTGAACCCCCACGCCTTCGGCGCCAGAACCTAAATCTGGTGCGTC 463 Query 190026 TGCCAATTTCGCCACATCCGC 190046 |||||||||||||||| |||| Sbjct 464 TGCCAATTTCGCCACACCCGC 484 >seq9101 Length=810 Score = 86.0 bits (94), Expect = 9e-12 Identities = 68/82 (83%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 193012 TGGTGGAGACAATGGGACTCGAACCCACGACCCCCAGCTTGCAAGGCTAGTGCTCTCCCA 193071 |||||||| | ||||| | ||||||||||||||| |||||||| || ||||||| ||| Sbjct 241 TGGTGGAGCCGGTGGGATTTGAACCCACGACCCCCTGCTTGCAAAGCAGGTGCTCTACCA 182 Query 193072 ACTGAGCTATATCCCCAAATTC 193093 ||||||||| |||||| ||| Sbjct 181 ACTGAGCTACGACCCCAAGTTC 160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 720367018956480