Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Beta_20vulgaris_20subsp._20vulgaris_20[refseq_20GCF_5F000511025.2_20 2015-07-07] 40,246 sequences; 566,550,431 total letters Query= NC_015250.1 Length=159801 Score E Sequences producing significant alignments: (Bits) Value seq32734 87.8 2e-12 seq31284 82.4 8e-11 >seq32734 Length=509 Score = 87.8 bits (96), Expect = 2e-12 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 68306 TGGTGCCGTCACTAGGATTCGAACCCAGGACCTGACGATTACAAATCGCCTGCTCTACCA 68365 |||||||| ||| |||| |||||||| ||||||| ||||||||||| ||||||||||| Sbjct 343 TGGTGCCGGCACCAGGAATCGAACCCGGGACCTGCTGATTACAAATCAGCTGCTCTACCA 402 Query 68366 TCTGAGCTATAACGGC 68381 ||||||||| |||| Sbjct 403 ACTGAGCTATGCCGGC 418 >seq31284 Length=518 Score = 82.4 bits (90), Expect = 8e-11 Identities = 67/79 (85%), Gaps = 2/79 (3%) Strand=Plus/Minus Query 69655 TTGGAGCGGTTGACGAGATTCGAACTCGCGACATCTGACTT-GGAAGGACAGCACTCTAC 69713 ||||||||| |||||||| |||||||||||||||| ||| |||||| | || |||||| Sbjct 321 TTGGAGCGGATGACGAGACTCGAACTCGCGACATCGACCTTGGGAAGGTC-GCGCTCTAC 263 Query 69714 CATCTGAGTTACAACCGCA 69732 || ||||| |||| ||||| Sbjct 262 CAACTGAGCTACATCCGCA 244 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 510978010351760