Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Beta_20vulgaris_20subsp._20vulgaris_20[refseq_20GCF_5F000511025.2_20 2015-07-07] 40,246 sequences; 566,550,431 total letters Query= NC_019544.1 Length=49335 Score E Sequences producing significant alignments: (Bits) Value seq30224 129 2e-25 >seq30224 Length=530 Score = 129 bits (142), Expect = 2e-25 Identities = 185/261 (71%), Gaps = 0/261 (0%) Strand=Plus/Plus Query 45479 GGCGTGGAGAAAGAAGATCGGACGGGAACAGGCACATTGTCGGTGTTCGGCCGTCAGCTG 45538 |||||||| || | || || || || || || || ||||||||||||||| |||| | Sbjct 177 GGCGTGGAAAAGCACGACCGCACCGGCACCGGAACGCTGTCGGTGTTCGGCCATCAGACG 236 Query 45539 CGCTTTAACTTGCAGGACGGATTCCCGCTCGTGACGACGAAAAAGTTGCATATCCGCTCG 45598 ||| || ||| | ||||||||||| | ||||| || ||| | || ||| Sbjct 237 CGCCACAATTTGGCCGCAGGATTCCCGCTGCTCACGACCAAGAAGCTATCCCTCAAATCG 296 Query 45599 ATCATTTATGAACTGCTCTGGTTTTTAAAAGGCGATACGAATGTTCGCTATTTGCAGGAG 45658 |||||| | |||||||||||||| | | |||||||| || | ||| | |||| Sbjct 297 ATCATTCACGAACTGCTCTGGTTCCTGAGGGGCGATACCAACATCAAGTATCTCAAGGAC 356 Query 45659 AATGGTGTGACGATTTGGGACGAGTGGGCCGATGAAAACGGCGATCTCGGCCCAATCTAC 45718 | || || |||| |||||||||||||| ||||| || ||||| ||||| || |||| Sbjct 357 CACGGCGTCTCGATCTGGGACGAGTGGGCGGATGAGAATGGCGACCTCGGTCCGGTCTAT 416 Query 45719 GGCGCGCAATGGCGGTCGTGG 45739 || | || ||||| || ||| Sbjct 417 GGTTCTCAGTGGCGCTCATGG 437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157675007731644