Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Beta_20vulgaris_20subsp._20vulgaris_20[refseq_20GCF_5F000511025.2_20 2015-07-07] 40,246 sequences; 566,550,431 total letters Query= NC_020867.1 Length=44892 Score E Sequences producing significant alignments: (Bits) Value seq26327 295 2e-75 seq190 260 4e-65 seq96 185 2e-42 seq20795 183 9e-42 seq22 120 9e-23 seq170 116 1e-21 seq1964 114 4e-21 seq126 113 1e-20 seq50 111 5e-20 seq57 102 2e-17 seq145 89.7 1e-13 seq223 86.0 2e-12 seq127 84.2 6e-12 seq58 80.6 8e-11 >seq26327 Length=568 Score = 295 bits (326), Expect = 2e-75 Identities = 401/554 (72%), Gaps = 4/554 (1%) Strand=Plus/Minus Query 42337 TTTGGTGTGCTGATGATTCCCTGTCTGCTCG-CTGCTACCACCTGT-TTTATTGTCGCTT 42394 |||||||| ||||||| |||| || | | |||| || | ||| |||||| | || | Sbjct 568 TTTGGTGTTTTGATGAT-CCCTACCTTATTGACTGCAACTTC-TGTATTTATTATAGCCT 511 Query 42395 TCATTGCTGCCCCTCCGGTAGACATTGATGGCATTCGTGAACCTGTCTCTGGCTCTCTTC 42454 |||||||||| ||||| ||||| |||||||| ||||| |||||||| || || ||||| | Sbjct 510 TCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGCGAACCTGTTTCCGGATCTCTAC 451 Query 42455 TGTATGGCAACAACATCATCTCTGGTGCCGTCGTGCCTAGCAGTAACGCAATTGGACTAC 42514 | || || ||||| || || ||||||||| | | |||| | || ||||| | | Sbjct 450 TTTACGGAAACAATATTATTTCTGGTGCCATTATTCCTACTTCTGCAGCTATTGGGTTGC 391 Query 42515 ATTTGTATTCGATCTGGGAAGCCAATACCCTTGACGAATGGCTCTACAATGGCGGACCTT 42574 | || ||| | || |||||||| | |||| || ||| | |||||||| || |||| Sbjct 390 ACTTTTATCCAATATGGGAAGCGGCATCGGTTGATGAGTGGTTATACAATGGTGGTCCTT 331 Query 42575 ATCAGCTCGTCGTGTTCCACTTCCTTATCGGTATCTTCTCTTACTTGGGACGCGAATGGG 42634 || |||| | || | |||||| | | ||| | | ||| |||| || || |||| Sbjct 330 ATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGG 271 Query 42635 AACTTTCGTACCGACTTGGGATGAGGCCCTGGATCTTTGTTGCTTACTCTGCCCCTGTGG 42694 ||||| | ||| || || ||| | || ||||| |||||| || || || || || | Sbjct 270 AACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCGGTTG 211 Query 42695 CTGCAGCGACTGCAGTCTTCCTTGTCTATCCATTTGGGCAAGGTTCTTTTTCAGATGGAA 42754 | || || ||||| || ||| | |||| ||| |||| ||||| ||||| ||||| | Sbjct 210 CAGCGGCTACTGCTGTTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTA 151 Query 42755 TGCCTCTTGGCATTTCCGGTACGTTCAACTTCATGTTGGTCTTCCAGGCTGAACATAACA 42814 ||||||| || || || ||||| |||||||| ||| | || ||||||||||| || |||| Sbjct 150 TGCCTCTAGGAATCTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACA 91 Query 42815 TTCTTATGCATCCTTTCCATATGCTTGGTGTTGCCGGCGTATTTGGTGGGTCGTTGTTCT 42874 | ||||||||||| || || ||| | ||||| || || ||||| || || || | || Sbjct 90 TCCTTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTTA 31 Query 42875 CAGCTATGCATGGT 42888 |||||||||||| Sbjct 30 GTGCTATGCATGGT 17 >seq190 Length=503529 Score = 260 bits (288), Expect = 4e-65 Identities = 380/532 (71%), Gaps = 5/532 (1%) Strand=Plus/Minus Query 42741 TTTTTCAGATGGAATGCCTCTTGGCATTTCCGGTACGTTCAACTTCATGTTGGTCTTCCA 42800 |||||| ||||| |||||||| | ||| |||| |||||||| ||| | || ||||| Sbjct 35702 TTTTTCTGATGGTATGCCTCTAGTTCTTT--GGTATTTTCAACTTTATGATTGTATTCCA 35645 Query 42801 GGCTGAACATAACATTCTTATGCATCCTTTCCATATGCTTGGTGTTGCCGGCGTATTTGG 42860 |||||| |||||||| ||| |||| || || || ||| | ||||| || || || || || Sbjct 35644 GGCTGAGCATAACATCCTTGTGCACCCATTTCACATGTTAGGTGTAGCTGGTGTTTTCGG 35585 Query 42861 TGGGTCGTTGTTCTCAGCTATGCATGGTAGTCTTGTCACCTCTTCTCTTGTGCGTGAAAC 42920 || || | || |||||||||||| | || || ||| | | | | ||||| Sbjct 35584 CGGCTCCCTATTTAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGAGAAAC 35525 Query 42921 GACTGAAAACGAAAGCCAAAATTATGGCTACAAGTTCGGTCAAGAGGAGGAGACTTATAA 42980 || |||| ||| ||| | || |||| |||||||||||||| || | ||||| Sbjct 35524 CACATAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAAATTATAT 35465 Query 42981 CATTGTTGCAGCGCATGGTTACTTTGGACGGCTTATCTTCCAATATGCGTCGTTT-AATA 43039 || || || || |||||||| ||| | || | |||||||||||||| | |||| || | Sbjct 35464 -ATCGTAGCCGCTCATGGTTATTTTCGTCGATTCATCTTCCAATATGC-TAGTTTCAACA 35407 Query 43040 ATAGTCGCTCTTTGCACTTCTTTCTTGCCGCTTGGCCCGTTGTGGGGATTTGGTTCACTT 43099 || ||| ||||| ||||| || | || |||||||| | || || ||| ||| ||| Sbjct 35406 ATTCTCGTTCTTTACACTTATTCTTAGCGGCTTGGCCTATAGTAGGTATTCAGTTTACTG 35347 Query 43100 CTCTTGGCGTCAGTACTATGGCGTTTAACTTGAATGGTTTTAACTTTAACCAATCACTTG 43159 || | || | ||||||||||| | ||| | |||||||| || || |||||||| | | Sbjct 35346 CTTTAGGTATTAGTACTATGGCTATCAACCTAAATGGTTTCAATTTCAACCAATCTGTAG 35287 Query 43160 TTGATAATCAGAATCATGTCATCCCTACTTGGGCTGATATTTTGAATCGTGCCAACCTTG 43219 || ||| || || |||||| ||| | |||| |||| | || ||||| ||||||| Sbjct 35286 TTAATAGTCTTGGTCGTGTCATTAATACCTAGGCTTATATCATTAACCGTGCTAACCTTG 35227 Query 43220 GCTTTGAGGTGATGCACGAGCGGAATGCACATAACTTCCCGCTTGATCTTGC 43271 | | || || ||||| || | ||||| ||||||||||| || || || || Sbjct 35226 GTATGGAAGTTATGCATGAATGTAATGCTCATAACTTCCCTCTAGACCTAGC 35175 >seq96 Length=52461754 Score = 185 bits (204), Expect = 2e-42 Identities = 304/433 (70%), Gaps = 4/433 (1%) Strand=Plus/Plus Query 42337 TTTGGTGTGCTGATGATTCCCTGTCTGCTCG-CTGCTACCACCTGT-TTTATTGTCGCTT 42394 |||||||| ||||||| |||| || | | |||| || | ||| |||||| | || | Sbjct 25270610 TTTGGTGTTTTGATGAT-CCCTACCTTATTGACTGCAACTTC-TGTATTTATTATAGCCT 25270667 Query 42395 TCATTGCTGCCCCTCCGGTAGACATTGATGGCATTCGTGAACCTGTCTCTGGCTCTCTTC 42454 |||||||||| ||||| ||||| ||| |||| ||||| ||||||| || || ||||| | Sbjct 25270668 TCATTGCTGCTCCTCCAGTAGATATTAATGGTATTCGCAAACCTGTTTCCGGATCTCTAC 25270727 Query 42455 TGTATGGCAACAACATCATCTCTGGTGCCGTCGTGCCTAGCAGTAACGCAATTGGACTAC 42514 | || || ||||| || || ||||||||| | | |||| | || || || | | Sbjct 25270728 TTTACGGAAACAATATTATTTCTGGTGCCATTATTCCTACTTCTGCAGCTATCGGGTTGC 25270787 Query 42515 ATTTGTATTCGATCTGGGAAGCCAATACCCTTGACGAATGGCTCTACAATGGCGGACCTT 42574 | || ||| | || |||||||| | |||| || ||| | |||||||| || |||| Sbjct 25270788 ACTTTTATCCAATATGGGAAGCGGCATCGGTTGATGAGTGGTTATACAATGGTGGTCCTT 25270847 Query 42575 ATCAGCTCGTCGTGTTCCACTTCCTTATCGGTATCTTCTCTTACTTGGGACGCGAATGGG 42634 || |||| | || | |||||| | | ||| | ||||| |||| || || |||| Sbjct 25270848 ATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCTTCTTATATGGGTCGTGAGTGGG 25270907 Query 42635 AACTTTCGTACCGACTTGGGATGAGGCCCTGGATCTTTGTTGCTTACTCTGCCCCTGTGG 42694 ||||| | ||| || || ||| | || ||||| |||||| || || || || || | Sbjct 25270908 AACTTAGTTTCCGTCTGGGTATGTGCCCTTGGATTGCTGTTGCATATTCAGCTCCGGTTG 25270967 Query 42695 CTGCAGCGACTGCAGTCTTCCTTGTCTATCCATTTGGGCAAGGTTCTTTTTCAGATGGAA 42754 || || ||||| || ||| | |||| ||| ||| ||||| ||||| ||||| | Sbjct 25270968 TAGCGGCTACTGCTGTTTTCTTGATCTACCCAATTGCTCAAGGAAGCTTTTCTGATGGTA 25271027 Query 42755 TGCCTCTTGGCAT 42767 ||||||| || || Sbjct 25271028 TGCCTCTAGGAAT 25271040 Score = 111 bits (122), Expect = 5e-20 Identities = 164/232 (71%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 42661 CCCTGGATCTTTGTTGCTTACTCTGCCCCTGTGGCTGCAGCGACTGCAGTCTTCCTTGTC 42720 || ||||| |||||| || || || || || | | || ||||| || ||| | || Sbjct 4492308 CCTTGGATTGCTGTTGCATATTCAGCTCCGGTTGTAACGGCTACTGCTGTTTTCTTGATC 4492367 Query 42721 TATCC----ATTTGGGCAAGGTTCTTTTTCAGATGGAATGCCTCTTGGCATTTCCGGTAC 42776 || || | |||| ||||| |||| ||||| |||||| | || || || ||||| Sbjct 4492368 TACCCGGCCAATTGGTCAAGGAAGCTTTTTTGATGGTATGCCTTTAGGAATCTCTGGTAC 4492427 Query 42777 GTTCAACTTCATGTTGGTCTTCCAGGCTGAACATAACATTCTTATGCATCCTTTCCATAT 42836 |||||||| ||| | || || |||||||| || ||||| |||||||| || || || || Sbjct 4492428 TTTCAACTTTATGATTGTATTTCAGGCTGAGCACAACATCCTTATGCACCCATTTCACAT 4492487 Query 42837 GCTTGGTGTTGCCGGCGTATTTGGTGGGTCGTTGTTCTCAGCTATGCATGGT 42888 | | ||||| | || ||||| || || || | || |||||||||||| Sbjct 4492488 GTTAGGTGTAGTTGGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCATGGT 4492539 >seq20795 Length=630 Score = 183 bits (202), Expect = 9e-42 Identities = 278/391 (71%), Gaps = 5/391 (1%) Strand=Plus/Plus Query 42796 TTCCAGGCTGAACATAACATTCTTATGCATCCTTTCCATATGCTTGGTGTTGCCGGCGTA 42855 ||||||||||| || ||||| |||||||| || || || ||| | ||||| | || ||| Sbjct 185 TTCCAGGCTGAGCACAACATCCTTATGCACCCGTTTCACATGTTAGGTGTAGTTGGTGTA 244 Query 42856 TTTGGTGGGTCGTTGTTCTCAGCTATGCATGGTAGTCTTGTCACCTCTTCTCTTGTGCGT 42915 || || | || |||| ||||| ||| || | || || ||| | | | | Sbjct 245 TTCGGCGACTCCCTGTTTGGTGCTATACATAGTTCCTTGGTAACTTCTAGTTTGATCAGG 304 Query 42916 GAAACGACTGAAAACGAAAGCCAAAATTATGGCTACAAGTTCGGTCAAGAGGAGGAGACT 42975 |||| || |||| ||| ||| | || |||| |||||||||||||| || ||| Sbjct 305 AAAACCACATAAAATGAATCTGCTAATGAAGGTTACATATTCGGTCAAGAGGAAGAAACT 364 Query 42976 TATAACATTGTTGCAGCGCATGGTTACTTTGGACGGCTTATCTTCCAATATGCGTCGTTT 43035 ||||| || || || || |||||||| ||||| || | |||||||||||||| | |||| Sbjct 365 TATAATATCGTAGCCGCTCATGGTTATTTTGGTCGATTGATCTTCCAATATGC-TAGTTT 423 Query 43036 -AATAATAGTCGCTCTTTGCACTTCT--TTCTT-GCCGCTTGGCCCGTTGTGGGGATTTG 43091 || ||| ||| ||||| ||||| | ||||| | ||||||| || || | ||||| Sbjct 424 CAACAATTCTCGTTCTTTACACTTATTCTTCTTAGTTGCTTGGCTTGTAGTATGTATTTG 483 Query 43092 GTTCACTTCTCTTGGCGTCAGTACTATGGCGTTTAACTTGAATGGTTTTAACTTTAACCA 43151 ||| ||| || | || | | ||||||||| || ||| | |||||||| || || ||||| Sbjct 484 GTTTACTGCTTTAGGTATTAATACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCA 543 Query 43152 ATCACTTGTTGATAATCAGAATCATGTCATC 43182 || ||||||| ||| || ||||||| Sbjct 544 ATTTGCAGTTGATAGTCAATGTCGTGTCATC 574 Score = 91.5 bits (100), Expect = 4e-14 Identities = 125/175 (71%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 43078 GTTGTGGGGATTTGGTTCACTTCTCTTGGCGTCAGTACTATGGCGTTTAACTTGAATGGT 43137 || || || |||||||| ||| || | || | |||| |||||| || ||| | |||||| Sbjct 2 GTAGTCGGTATTTGGTTTACTACTTTAGGTATTAGTATTATGGCTTTCAACCTAAATGGT 61 Query 43138 TTTAACTTTAACCAATCACTTGTTGATAATCAGAATCATGTCATCCCTACTTGGGCTGAT 43197 || || |||||||||| | |||| || ||| || |||||| | | ||||||||| Sbjct 62 TTCAATTTTAACCAATTTGTAGTTGGTAGTCAAGGTCGTGTCATTAATGCCTGGGCTGAT 121 Query 43198 ATTTTGAATCGTGCCAACCTTGGCTTTGAGGTGATGCACGAGCGGAATGCACATA 43252 || | | || | ||| |||| | || || ||||| || || ||||| |||| Sbjct 122 ATCATTATCCGGGATAACATTGGTATGGAAGTTATGCATGAACGTAATGCTCATA 176 >seq22 Length=40393389 Score = 120 bits (132), Expect = 9e-23 Identities = 228/331 (69%), Gaps = 11/331 (3%) Strand=Plus/Plus Query 42946 GGCTACAAGTTCGGTCAAGAGGAGGAGACTTATAACATTGTTGCAGCGCATGGTTACTTT 43005 || ||||| |||| ||||||| | |||||||| || || | || |||| ||| ||| Sbjct 6368203 GGTTACAAATTCGATCAAGAGCAAATAACTTATAATATCGTAGTCGCACATGCTTATTTT 6368262 Query 43006 GGACGGCTT-ATCTTCCAATATGCGT--CGTTTAATAATAGTCGCTCTTTGCACTTCTTT 43062 || || || ||||||||||| || | || || ||| | ||||| |||||||| Sbjct 6368263 GGTCGAATTGATCTTCCAATAAGCTATACCTTCAACAATTATGATTCTTTACACTTCTTC 6368322 Query 43063 CTTGCCGCTTGGCCCGTT----GTGGGGATTTGGTTCACTTCTCTTGGCGTCAGTACTAT 43118 | | ||||| || || || || |||| ||| || || | || | |||||||| Sbjct 6368323 TTAGTTGCTTGACCTGTATGTAGTAGGTATTTAGTTTACCGCTTTAGGTATTAGTACTAT 6368382 Query 43119 GGCGTTTAACTTGAATGGTTTTAACTTTAACCAATCACTTGTTGATAATCAGAATCATGT 43178 | || || | ||||||| || || |||||||| | ||||||| ||| || | | Sbjct 6368383 ATCCTTCAATCTAGATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTTT 6368442 Query 43179 CATCCCTACTTGGGCTGATATTTTGA---ATCGTGCCAACCTTGGCTTTG-AGGTGATGC 43234 || ||| ||| |||||||| | | | ||||| |||||| | | || | || ||| Sbjct 6368443 AATTAATACCTGGCCTGATATTATTATCAACCGTGCGAACCTTTGGTATGGAAGTTGTGC 6368502 Query 43235 ACGAGCGGAATGCACATAACTTCCCGCTTGA 43265 |||| || |||| ||||||||||| || || Sbjct 6368503 ACGATCGTAATGTTCATAACTTCCCCCTAGA 6368533 >seq170 Length=38796167 Score = 116 bits (128), Expect = 1e-21 Identities = 128/168 (76%), Gaps = 2/168 (1%) Strand=Plus/Plus Query 43015 ATCTTCCAATATGCGTCGTTT-AATAATAGTCGCTCTTTGCACTTCTTTCTTGCCGCTTG 43073 |||||||||||||| | |||| || || ||| ||||| |||||||| | || |||| Sbjct 2057931 ATCTTCCAATATGC-TAGTTTCAACGATTCTCGTTCTTTACACTTCTTCTTAGCTACTTG 2057989 Query 43074 GCCCGTTGTGGGGATTTGGTTCACTTCTCTTGGCGTCAGTACTATGGCGTTTAACTTGAA 43133 || || || || |||||||||||| || | || | ||||||||||| || ||| | || Sbjct 2057990 GCTTGTAGTAGGTATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAACCTAAA 2058049 Query 43134 TGGTTTTAACTTTAACCAATCACTTGTTGATAATCAGAATCATGTCAT 43181 |||||| || || |||||||| | ||||||| ||| || |||||| Sbjct 2058050 TGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTCAT 2058097 Score = 102 bits (112), Expect = 2e-17 Identities = 135/186 (73%), Gaps = 1/186 (1%) Strand=Plus/Plus Query 43086 GATTTGGTTCACTTCTCTTGGCGTCAGTACTATGGCGTTTAACTTGAATGGTTTTAACTT 43145 |||| ||| ||| || | || | |||| |||||| || ||| | |||||||| || || Sbjct 32379312 GATTCGGTATACTGCTTTAGGTATTAGTATTATGGCTTTCAACCTAAATGGTTTCAATTT 32379371 Query 43146 TAACCAATCACTTGTTGATAATCAGAATCATGTCATCCCTACTTGGGCTGATATTTTGAA 43205 |||||||| | ||||||| ||| ||| ||| || ||| |||| |||||| | || Sbjct 32379372 CAACCAATCTGTAGTTGATAGTCAAGATCGTGTAATTAATACCTGGG-TGATATCATTAA 32379430 Query 43206 TCGTGCCAACCTTGGCTTTGAGGTGATGCACGAGCGGAATGCACATAACTTCCCGCTTGA 43265 | ||| |||| ||| | || || ||||| || | ||||| ||||||||||| || || Sbjct 32379431 CCATGCTAACCATGGTGTCGAAGTTATGCATGAACACAATGCTCATAACTTCCCTCTAGA 32379490 Query 43266 TCTTGC 43271 || || Sbjct 32379491 CCTAGC 32379496 >seq1964 Length=2038 Score = 114 bits (126), Expect = 4e-21 Identities = 120/155 (77%), Gaps = 2/155 (1%) Strand=Plus/Plus Query 42940 AATTATGGCTACAAGTTCGGTCAAGAGGAGGAGACTTATAACATTGTTGCAGCGCATGGT 42999 ||| | || |||| |||||||||||||| || |||||| | ||||| || | |||||| Sbjct 662 AATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACTTATGATATTGTAGCCGTTCATGGT 721 Query 43000 TACTTTGGACGGCTTATCTTCCAATATGCGTCGTTT-AATAATAGTCGCTCTTTGCACTT 43058 || ||||| || | |||||||||||||| | |||| || ||| || ||||| ||||| Sbjct 722 TATTTTGGTCGATTGATCTTCCAATATGC-TAGTTTAAACAATTCTCATTCTTTACACTT 780 Query 43059 CTTTCTTGCCGCTTGGCCCGTTGTGGGGATTTGGT 43093 ||| | || |||||||| || || || ||||||| Sbjct 781 CTTCTTAGCTGCTTGGCCTGTAGTAGGCATTTGGT 815 >seq126 Length=369524 Score = 113 bits (124), Expect = 1e-20 Identities = 152/208 (73%), Gaps = 3/208 (1%) Strand=Plus/Plus Query 43014 TATCTTCCAATATGCGTCGTTT-AATAATAGTCGCTCTTTGCACTTCTTTCTTGCCGCTT 43072 ||||||||||||||| | |||| || ||| ||| ||||| |||||||| | || |||| Sbjct 171131 TATCTTCCAATATGC-TAGTTTCAACAATTCTCGTTCTTTACACTTCTTCTTAGCTGCTT 171189 Query 43073 GGCCCGTTGTGGGGATTTGGTTCACTTCTCTTGGCGTCAGTACTATGGCGTTTAACTTGA 43132 | || || || || |||||||| | || | || | ||||||||||| || || | | Sbjct 171190 GACCTGTAGTAGGTATTTGGTTTTTTGCTTTAGGTATTAGTACTATGGCTTTCAATCTAA 171249 Query 43133 ATGGTTTTAACTTTAACCAATCACTTGTTGATAATCAGAATCATGTCATCCCTACTTGGG 43192 ||||||| || || |||||||| | |||||| || || ||||| ||| |||| Sbjct 171250 ATGGTTTCAATTTCAACCAATCTATAGTTGAT-GGCAAGGTCGTGTCACTAATACCTGGG 171308 Query 43193 CTGATATTTTGAATCGTGCCAACCTTGG 43220 |||||| || ||||| |||||||| Sbjct 171309 GTGATATCAGTAACCGTGCTAACCTTGG 171336 >seq50 Length=1444883 Score = 111 bits (122), Expect = 5e-20 Identities = 149/202 (74%), Gaps = 4/202 (2%) Strand=Plus/Plus Query 42337 TTTGGTGTGCTGATGATTCCCTGTCTGCTCG-CTGCTACCACCTGT-TTTATTGTCGCTT 42394 |||||||| ||||||| |||| || | | |||| | | ||| |||||| | || | Sbjct 509072 TTTGGTGTTTTGATGAT-CCCTACCTTATTGACTGCAAATTC-TGTATTTATTATAGCCT 509129 Query 42395 TCATTGCTGCCCCTCCGGTAGACATTGATGGCATTCGTGAACCTGTCTCTGGCTCTCTTC 42454 |||||||||| ||||| ||||| |||||||| ||||| |||||||| || || ||||| | Sbjct 509130 TCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGCGAACCTGTTTCCGGATCTCTAC 509189 Query 42455 TGTATGGCAACAACATCATCTCTGGTGCCGTCGTGCCTAGCAGTAACGCAATTGGACTAC 42514 | || || ||||| || || ||||||||| | | |||| | || ||||| | | Sbjct 509190 TTTACGGAAACAATATTATTTCTGGTGCCATTATTCCTACTTCTGCAGCTATTGGGTTGC 509249 Query 42515 ATTTGTATTCGATCTGGGAAGC 42536 | || ||| | || |||||||| Sbjct 509250 ACTTTTATCCAATATGGGAAGC 509271 >seq57 Length=33024243 Score = 102 bits (112), Expect = 2e-17 Identities = 122/163 (75%), Gaps = 2/163 (1%) Strand=Plus/Plus Query 42940 AATTATGGCTACAAGTTCGGTCAAGAGGAGGAGACTTATAACATTGTTGCAGCGCATGGT 42999 ||| | || |||| || ||||||||||| || |||||||| | || || | |||||| Sbjct 2481601 AATGAAGGTTACATATTTGGTCAAGAGGAAGAAACTTATAATTTCGTAGCCACTCATGGT 2481660 Query 43000 TACTTTGGACGGCTTATCTTCCAATATGCGTCGTTT-AATAATAGTCGCTCTTTGCACTT 43058 || ||| | || | |||||||||||||| | |||| || ||| ||| ||||| ||||| Sbjct 2481661 TATTTTCGCCGATTGATCTTCCAATATGC-TAGTTTCAACAATTCTCGTTCTTTACACTT 2481719 Query 43059 CTTTCTTGCCGCTTGGCCCGTTGTGGGGATTTGGTTCACTTCT 43101 ||| | || |||| ||| | || || |||||||| ||| || Sbjct 2481720 CTTCTTAGCTGCTTCGCCTTTAGTAGGCATTTGGTTTACTGCT 2481762 >seq145 Length=44152522 Score = 89.7 bits (98), Expect = 1e-13 Identities = 99/127 (78%), Gaps = 4/127 (3%) Strand=Plus/Plus Query 42310 ACTAACAACCGTCTTTATGTTGGGTGGTTTGGTGTGCTGATGATTCCCTGTCTGCTCG-C 42368 ||| | |||||||||||| |||| ||||||||| | ||||||| |||| || | | | Sbjct 40817897 ACTGAAAACCGTCTTTATATTGGATGGTTTGGTATTTTGATGAT-CCCTACCTTATTGAC 40817955 Query 42369 TGCTACCACCTGT-TTTATTGTCGCTTTCATTGCTGCCCCTCCGGTAGACATTGATGGCA 42427 ||| || | ||| |||||| | || ||||||||||| ||||| | ||| ||| |||| | Sbjct 40817956 TGCAACTTC-TGTATTTATTATAGCCTTCATTGCTGCTCCTCCAGCAGATATTCATGGTA 40818014 Query 42428 TTCGTGA 42434 ||||||| Sbjct 40818015 TTCGTGA 40818021 >seq223 Length=728060 Score = 86.0 bits (94), Expect = 2e-12 Identities = 144/208 (69%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 42685 GCCCCTGTGGCTGCAGCGACTGCA----GTCTTCCTTGTCTATCCATTTGGGCAAGGTTC 42740 || || || || || || |||||| || ||| | |||| || |||| ||||| Sbjct 691471 GCTCCGGTTGCAGCGGCTACTGCATGTTGTTTTCGTGATCTACTCAATTGGTCAAGGAAG 691412 Query 42741 TTTTTCAGATGGAATGCCTCTTGGCATTTCCGGTACGTTCAACTTCATGTTGGTCTTCCA 42800 ||||| ||||| ||| ||| || || || || | || ||||| ||| | || ||||| Sbjct 691411 CTTTTCTGATGGTATGTCTCAAGGAATCTCTGGAATTTTTAACTTTATGATTGTATTCCA 691352 Query 42801 GGCTGAACATAACATTCTTATGCATCCTTTCCATATGCTTGGTGTTGCCGGCGTATTTGG 42860 |||||| || ||||| |||||||| || | || ||| | || | || || ||||||| Sbjct 691351 GGCTGAGCACAACATCCTTATGCACCCACTTCACATGTTAGGAATAGCTGGTGTATTTGA 691292 Query 42861 TGGGTCGTTGTTCTCAGCTATGCATGGT 42888 || | || || ||||||||| || Sbjct 691291 CGGCTTCTTATTTAGTGCTATGCATAGT 691264 >seq127 Length=60962716 Score = 84.2 bits (92), Expect = 6e-12 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 43141 AACTTTAACCAATCACTTGTTGATAATCAGAATCATGTCATCCCTACTTGGGCTGATATT 43200 || || |||||||| | |||||| ||| || |||||| ||| ||||||||||| Sbjct 49338969 AATTTCAACCAATCTGTAATTGATAGTCAAGGTCGTGTCATTAATACCTGGGCTGATATC 49338910 Query 43201 TTGAATCGTGCCAACCTTGGCTTTGAGGTGATGCACGAGCGGAATGCACATAACTTCCC 43259 | || ||||| |||||||| | || || ||||| || || ||||| ||||||||||| Sbjct 49338909 ATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCC 49338851 >seq58 Length=2649046 Score = 80.6 bits (88), Expect = 8e-11 Identities = 71/89 (80%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 42940 AATTATGGCTACAAGTTCGGTCAAGAGGAGGAGACTTATAACATTGTTGCAGCGCATGGT 42999 ||| | || ||||| |||||| ||||||| || |||||||| || || || || |||| | Sbjct 2463114 AATGAAGGTTACAAATTCGGTTAAGAGGAAGAAACTTATAATATCGTAGCCGCTCATGAT 2463055 Query 43000 TACTTTGGACGGCTTATCTTCCAATATGC 43028 || ||||| || | |||||||||||||| Sbjct 2463054 TATTTTGGTCGATTGATCTTCCAATATGC 2463026 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143464202624808