Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Beta_20vulgaris_20subsp._20vulgaris_20[refseq_20GCF_5F000511025.2_20 2015-07-07] 40,246 sequences; 566,550,431 total letters Query= NC_021299.1 Length=80955 Score E Sequences producing significant alignments: (Bits) Value seq18444 284 6e-72 >seq18444 Length=649 Score = 284 bits (314), Expect = 6e-72 Identities = 458/652 (70%), Gaps = 5/652 (1%) Strand=Plus/Plus Query 59377 TGGGGCACGCTGACGGAGGAAGAGCAAGTCCTCACGATGCGGGTCTTCACCGGCCTGACG 59436 |||| ||||| | | |||||||| || || || || ||||||||||||||||| Sbjct 1 TGGGCGACGCTTAACGCCGAAGAGCAGAAGCTGACCATCCGCGTCTTCACCGGCCTGACA 60 Query 59437 ATGCTCGACACGATCCAGGGCACCGTGGGTGCTGTGAGCCTGATCCCTGACGCGATCACG 59496 |||||||||| |||||| ||| || | || ||||||| | || | | || Sbjct 61 CTGCTCGACACCATCCAGAATGGCGTCGGCACCGTCCGCCTGATGGCCGATGTGCAGACC 120 Query 59497 CCGCACGAGGAGGCGGTGTACACGAACATCGCGTTCATGGAGTCGGTGCACGCGAAGAGC 59556 ||||| || || |||||| | |||||| | |||||||| |||| || || | Sbjct 121 CCGCATGAAGAAGCGGTGCTGTCCAACATCTCCTTCATGGAAGCGGTCCATGCCCGCTCC 180 Query 59557 TACAGCAACATCTTCTCGACGCTGTGCTCGTCCAAGGAGATCGACGCGGCGTTCCGCTGG 59616 || ||||| ||||| ||||| ||| | || |||||| || | |||||| Sbjct 181 TATTCGTCGATCTTTTCGACCCTGTGTTCGACGCCCGATGTCGACGACGCCTATCGCTGG 240 Query 59617 TCGGAGGAGAATCCGAACCTGCAACGCAAGGCTCAGATCGTCCTGGACTACTACCAGGGT 59676 ||||||||| | ||| || | ||||| | | || || | | || | | Sbjct 241 AGCGAGGAGAATGCCTTCCTCCAGCAGAAGGCGACGCTGATCATGAGCCAGTATGACAGC 300 Query 59677 GACGATCCGCT-GAAGCGGAAGGTGGCCTCGACGTTGCTGGAGGGGTTCCTGTTCTACTC 59735 | ||| |||| |||| |||||| |||||| || || || | ||||||||||| || Sbjct 301 GGCGACTCGCTTGAAGAAGAAGGTCGCCTCGGTCTTCCTCGAAAGCTTCCTGTTCTATTC 360 Query 59736 GGGCTTCTACCTGCCGATGTACTGGTCTAGTCGGGGGAAGCTGACGAACACGGCCGACAT 59795 |||||||||||||| ||||||||||| || || | |||||||| || || |||||| | Sbjct 361 CGGCTTCTACCTGCCCATGTACTGGTCGAGCCGCGCCAAGCTGACCAATACCGCCGACCT 420 Query 59796 GATCCGGCTCATCATTCGTGACGAGGCGGTGCACGGCTACTACATCGGATACAAGTTCCA 59855 ||||| |||||||| |||||||| ||||||||||| || ||||| ||||||||||| Sbjct 421 CATCCGCCTCATCATCAAGGACGAGGCCGTGCACGGCTATTATATCGGCTACAAGTTCCA 480 Query 59856 GCGCGGCCTGGAGACTCAGAACGAGGCTCGCCGCGAGGAGCTGAAGGACTACACGTACGG 59915 ||||| | ||| | ||| || ||| |||| | ||||||| | | || Sbjct 481 GCGCGAGGTTGAGCGCCTCCCCGAAGCCCGCAAGCAGGAAATCAAGGACTTTGCCTTCGA 540 Query 59916 TCTGCTACTCGAGTTGTACGACAACGAGATTGAG-TACACGCAGGATCTGTACGACGGCG 59974 ||| || ||||| | ||||||||||| | | | ||||| |||| || || ||||||| Sbjct 541 TCT-CTCCTCGA-CTCTACGACAACGA-AGCGCGCTACACCGAGGACCTCTATGACGGCG 597 Query 59975 TGGGACTGACTGAGGATGTCAAGATGTTCCTGCGCTACAACGCCAACAAGGC 60026 |||| || | || || ||||||| ||||||| |||||||||||||||||| Sbjct 598 TGGGCCTTGCCGAAGACGTCAAGAAATTCCTGCACTACAACGCCAACAAGGC 649 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 258804194731896