Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Beta_20vulgaris_20subsp._20vulgaris_20[refseq_20GCF_5F000511025.2_20 2015-07-07] 40,246 sequences; 566,550,431 total letters Query= NC_021309.1 Length=74711 Score E Sequences producing significant alignments: (Bits) Value seq26599 100 1e-16 >seq26599 Length=563 Score = 100 bits (110), Expect = 1e-16 Identities = 283/433 (65%), Gaps = 4/433 (1%) Strand=Plus/Plus Query 64807 CCGAGGGGCCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGT 64866 ||| | ||||| | || ||||| || || || ||| || || ||| | || || Sbjct 109 CCGCGCGGCCGCATCGTTGAAATTTATGGTCCTGAAAGCTCCGGCAAGACGACGCTTGCC 168 Query 64867 CTCCACGCGGTGGCCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAG 64926 || || || | ||| | || |||||| || |||| || | | |||| || || Sbjct 169 CTGCAGACGATCGCCGAAGCCCAGAAGAAGGGCGGCATTTGCGGTTTCGTCGATGCCGAA 228 Query 64927 CACTCCCTGGACCCCGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTG 64986 ||| | || || || | || ||| |||||| || || || || || ||| || | Sbjct 229 CACGCGCTTGATCCGGTCTATGCCCGCAAGCTCGGCGTCGATCTTGAAAATCTCTTGATC 288 Query 64987 GTTCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGC 65046 |||||||| |||||||||||||| || || ||| ||| || || || || Sbjct 289 TCGCAGCCGGATACTGGCGAGCAGGCGCTTGAAATCACCGACACACTTGTGCGTTCGGGT 348 Query 65047 GAGCTGTCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAA 65106 | ||| | |||| | || || || || || || |||||||| || || ||||| Sbjct 349 GCGCTCGATGTTCTCGTGATCGATTCGGTTGCAGCACTCGTGCCGCGTGCTGAAATCGAA 408 Query 65107 GGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGC 65166 ||||| || || ||||| | ||||| || ||||| || ||| ||||| ||||| Sbjct 409 GGCGAGATGGGCGACAGCCTTCCGGGCCTCCAGGCGCGTCTGATGAGCCAGGCGCTGCGC 468 Query 65167 AAGCTCACTGGCACCATCTCCAGCACCAA-CACGCTGACGCTCTGGGTCAACCAGTTGCG 65225 ||||| || | | ||||||| | || || | | | ||| |||||||| | || Sbjct 469 AAGCTTACCGCTTCGATCTCCAAGTCGAAGCATGGTCA---TCTTCATCAACCAGATCCG 525 Query 65226 CGAGAAGATCGGC 65238 | |||||||||| Sbjct 526 CATGAAGATCGGC 538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 238833195276832