Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Beta_20vulgaris_20subsp._20vulgaris_20[refseq_20GCF_5F000511025.2_20 2015-07-07] 40,246 sequences; 566,550,431 total letters Query= NC_021339.1 Length=51077 Score E Sequences producing significant alignments: (Bits) Value seq27016 158 4e-34 >seq27016 Length=551 Score = 158 bits (174), Expect = 4e-34 Identities = 177/237 (75%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 40251 AAGTCGATGTCGACATCGGGCATGGACACGCGCTCGGGGTTCAGGAAGCGCTCGAAGATG 40310 ||||||||||||| |||||||| || || || || || ||||||||||||||||| | Sbjct 536 AAGTCGATGTCGAAGTCGGGCATCGAAACCCGTTCCGGATTCAGGAAGCGCTCGAACAGC 477 Query 40311 AGCCCGTGCTCCAGCGGGTCGAGGTCGGTGATCCCGAGGACGTAGGCGACCAGCGAACCG 40370 | | | ||| ||||| || || ||||| || || || || || ||||||||||| Sbjct 476 AAGTCATACTCAAGCGGATCAAGATCGGTAATGCCCAGTGAATACGCCACCAGCGAACCA 417 Query 40371 GCCGCAGAGCCCCGCCCAGGGCCGACCCAGACCCCGTTCTCCTTCGCCCAGCGGATGAAG 40430 || | || ||||| || || |||||| || ||||| |||| |||||| ||||||| Sbjct 416 GCGCCGGAACCCCGGCCCGGACCGACCGGCACACCGTTGGCCTTGGCCCAGTTGATGAAG 357 Query 40431 TCCGCGACGACGAGGAAGTACGACGGGAACCCCATCTGGATGATCATGTCGATCTCG 40487 || || |||| |||||||| ||||| |||||||| ||| ||| |||||||| Sbjct 356 TCGGCCACGATCAGGAAGTAGCCGGGGAAGCCCATCTGTTGGATGATGCCGATCTCG 300 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 163246743607428