Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Beta_20vulgaris_20subsp._20vulgaris_20[refseq_20GCF_5F000511025.2_20 2015-07-07] 40,246 sequences; 566,550,431 total letters Query= NC_021531.1 Length=223989 Score E Sequences producing significant alignments: (Bits) Value seq30224 161 1e-34 >seq30224 Length=530 Score = 161 bits (178), Expect = 1e-34 Identities = 197/266 (74%), Gaps = 2/266 (1%) Strand=Plus/Plus Query 98946 AAGAAAGACCGTACCGGTACAGGCACGCTTTCTATCTTCGGCCACCAGATGCGTTTCAAC 99005 ||| | ||||| ||||| || || ||||| || | |||||||| |||| ||| ||| Sbjct 186 AAGCACGACCGCACCGGCACCGGAACGCTGTCGGTGTTCGGCCATCAGACGCGCCACAAT 245 Query 99006 TTGCAAGAAGGTTTCCCGCTGGTAACGACCAAGC-GTTGCCACCTGCGCTCTATTATCCA 99064 ||| | ||| ||||||||| | ||||||||| | | | ||| || || || || Sbjct 246 TTGGCCGCAGGATTCCCGCTGCTCACGACCAAGAAGCTATC-CCTCAAATCGATCATTCA 304 Query 99065 TGAACTGCTGTGGTTCCTGAAAGGCGACACCAATATCCAGTACCTGAAAGATAATGGTGT 99124 |||||||| |||||||||| ||||| ||||| ||| |||| || || || | || || Sbjct 305 CGAACTGCTCTGGTTCCTGAGGGGCGATACCAACATCAAGTATCTCAAGGACCACGGCGT 364 Query 99125 AACCATTTGGGACGAATGGGCGGACAAAAATGGCGACCTCGGTCCGGTATACGGTAAGCA 99184 | || |||||||| |||||||| | |||||||||||||||||||| || ||| || Sbjct 365 CTCGATCTGGGACGAGTGGGCGGATGAGAATGGCGACCTCGGTCCGGTCTATGGTTCTCA 424 Query 99185 GTGGCGGGCATGGACTGCGCATGATG 99210 |||||| ||||| | |||| |||| Sbjct 425 GTGGCGCTCATGGCCGGCGCCGGATG 450 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716276277941840