Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Beta_20vulgaris_20subsp._20vulgaris_20[refseq_20GCF_5F000511025.2_20 2015-07-07] 40,246 sequences; 566,550,431 total letters Query= NC_021533.1 Length=45942 Score E Sequences producing significant alignments: (Bits) Value seq17123 86.0 2e-12 seq32375 84.2 6e-12 >seq17123 Length=675 Score = 86.0 bits (94), Expect = 2e-12 Identities = 55/60 (92%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 3889 GTAGCTCAATTGGTAGAGCGGCGGTCTCCAAAGCCGCTGGCTGCAGGTTCGAGTCCTGCC 3948 |||||||||||||||||||||||||||||||| ||| |||||| ||||| ||||||||| Sbjct 409 GTAGCTCAATTGGTAGAGCGGCGGTCTCCAAAACCGTAGGCTGCGGGTTCAAGTCCTGCC 350 >seq32375 Length=510 Score = 84.2 bits (92), Expect = 6e-12 Identities = 66/79 (84%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 3882 TAGGCGCGTAGCTCAATTGGTAGAGCGGCGGTCTCCAAAGCCGCTGGCTGCAGGTTCGAG 3941 |||| | ||||||| ||||||||||||||||||||||| |||| || ||||||||||| Sbjct 256 TAGGGGTATAGCTCAGTTGGTAGAGCGGCGGTCTCCAAAACCGCAGGTCGCAGGTTCGAG 315 Query 3942 TCCTGCCGCGTCTGCTACT 3960 ||||| || |||| ||| Sbjct 316 CCCTGCTGCCCCTGCCACT 334 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146822596809408