Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Beta_20vulgaris_20subsp._20vulgaris_20[refseq_20GCF_5F000511025.2_20 2015-07-07] 40,246 sequences; 566,550,431 total letters Query= NC_021557.1 Length=37378 Score E Sequences producing significant alignments: (Bits) Value seq31976 170 5e-38 >seq31976 Length=515 Score = 170 bits (188), Expect = 5e-38 Identities = 305/440 (69%), Gaps = 9/440 (2%) Strand=Plus/Minus Query 36347 AGCGGCGATGTGGCTAATCTGTTCCGTATTCTCCAGCGCCACTATCCGCAGTTTATGGAA 36406 ||||||||||| || | ||||||| | || | ||||| ||||||||||| || ||||| Sbjct 515 AGCGGCGATGTCGCCACTCTGTTCAGGGTTTTGCAGCGGCACTATCCGCAATTGATGGAT 456 Query 36407 ACCCTTCGGTTCCAGATCACGTCACGACGCGAGTTCGAACGGCTCTCGAAAGTCGATCCT 36466 || ||||||||||| || ||||| ||||| |||||| | ||| || Sbjct 455 GTTCTCAAATTCCAGATCACCAGCCGCCGCGAATTCGACCGGCTCCGGGCCACCGACACT 396 Query 36467 TCGACGCTAACCGACCTGGAGCGCGCCGCTCGCTTCCTCTATCTCCAGCGCACTGCCTTC 36526 | || ||||| ||| |||| ||||| || || | |||||||| || || |||||| Sbjct 395 GCCACCCTAACGGACTTGGAACGCGCAGCACGTCTTCTCTATCTTCAACGGCTCGCCTTC 336 Query 36527 GGCGGTAAGGTTGCGGGGCAAAACTTCGGCGTGACGAT---GACCGGC--GCTCGCTTCA 36581 ||||| ||||| |||||| | ||||||||| |||| | ||| || | |||| Sbjct 335 GGCGGAAAGGTATCGGGGCGCAGCTTCGGCGT--CGATCGCAATGGGCCTGCAAGGTTCA 278 Query 36582 ATCTTCTGAAACTCGCCCCCCAACTGGAAGCGATCCACGAGCGGATGGCAGGTGTTGTCA 36641 || ||||| || ||| || |||||||| | | ||||||||| | || || || || Sbjct 277 ATGTTCTGCGTCTTGCCTCCGTACTGGAAGAGGTTCACGAGCGGCTTGCCGGCGTCACCA 218 Query 36642 TCGAGCAGTTGCCATGGCGAAAATTTGTCGAGCGCTATGATCGGCCGGGGATGCTTTTTT 36701 | || | |||| |||| | ||| | || ||||| || || | | | ||| || | Sbjct 217 TTGAAAACATGCCCTGGCAGGAGTTTATTGATCGCTACGACCGTGCCGAAACGCTGTTCT 158 Query 36702 ATCTCGATCCGCCCTATTGGGGGAATGAGAAGGACTATGGCACGGGCG-TATTCGGTCGT 36760 ||||||||||||| |||| || ||| | || ||||| ||| | | ||| |||| Sbjct 157 ATCTCGATCCGCCGTATTATGGATGCGAGGACGATTATGG-GCGGAAGTTGTTCAGTCGC 99 Query 36761 GAGGAGTTTGGCGAAATGGC 36780 || | |||| |||||||| Sbjct 98 GATCAATTTGAGGAAATGGC 79 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119430894145680