Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Beta_20vulgaris_20subsp._20vulgaris_20[refseq_20GCF_5F000511025.2_20 2015-07-07] 40,246 sequences; 566,550,431 total letters Query= NC_021864.1 Length=55282 Score E Sequences producing significant alignments: (Bits) Value seq22541 129 2e-25 >seq22541 Length=609 Score = 129 bits (142), Expect = 2e-25 Identities = 134/176 (76%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 41987 TTCCATAATCAAGTTACCCGATAGGACAGCGTTATCGACAGCCATACGCATAAACCCATT 42046 ||| | ||| | |||||||| || |||||||||| |||||||||||||| || ||||| Sbjct 413 TTCAAGAATGACATTACCCGAAAGAGCAGCGTTATCCACAGCCATACGCATGAAACCATT 354 Query 42047 CATAAGAGTTTGTGTGTCGTCCATGTTCTCTGCGATACCTACACCAAAGAAGGAGTATGG 42106 ||| || || | ||| ||||||||| || | || | |||||||||||| || || Sbjct 353 CATGAGCAACTGGGAGTCCATCATGTTCTCAGCAACGCCGATACCAAAGAAGGAATAGGG 294 Query 42107 GTTCAGTTCGTATGGTGCAGCGTGATATGGAATGCGGCTAGGCTTAAATGGATTAA 42162 |||||||| ||||| |||||| || ||||| | | |||||| || ||||||| Sbjct 293 ATTCAGTTCATATGGAATAGCGTGGTAGGGAATTCTGGAAGGCTTGAAAGGATTAA 238 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 176696312699088