Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Beta_20vulgaris_20subsp._20vulgaris_20[refseq_20GCF_5F000511025.2_20 2015-07-07] 40,246 sequences; 566,550,431 total letters Query= NC_022052.1 Length=76050 Score E Sequences producing significant alignments: (Bits) Value seq33471 84.2 1e-11 seq32096 82.4 4e-11 >seq33471 Length=504 Score = 84.2 bits (92), Expect = 1e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 63471 GGTTGTAGCGCAGCTTGGTAGCGCGCCTGATTTGGATTCAGGGGGTCGGAGGTTCAAATC 63530 || ||| ||||||||||||||||| ||||| | || ||||||||||| ||||||||||| Sbjct 340 GGCTGTGGCGCAGCTTGGTAGCGCACCTGACTGGGGGTCAGGGGGTCGCAGGTTCAAATC 399 Query 63531 CTTCCAGCCAGACA 63544 || ||||| |||| Sbjct 400 CTGTCAGCCCGACA 413 >seq32096 Length=514 Score = 82.4 bits (90), Expect = 4e-11 Identities = 60/70 (86%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 64721 CGTTAGCTCAGTTGGTAGAGCAGCCGACTCTTAATCGGCGGGTCGGGGGTTCAAGTCCCT 64780 |||||||||||||||||||||||| ||||||||||| | ||||| | |||| |||| || Sbjct 122 CGTTAGCTCAGTTGGTAGAGCAGCGGACTCTTAATCCGTAGGTCGAGTGTTCGAGTCACT 181 Query 64781 CACGGCGCAC 64790 |||| | ||| Sbjct 182 CACGCCCCAC 191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 243115893590466