Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Beta_20vulgaris_20subsp._20vulgaris_20[refseq_20GCF_5F000511025.2_20 2015-07-07] 40,246 sequences; 566,550,431 total letters Query= NC_022067.1 Length=109960 Score E Sequences producing significant alignments: (Bits) Value seq4641 87.8 1e-12 >seq4641 Length=915 Score = 87.8 bits (96), Expect = 1e-12 Identities = 142/202 (70%), Gaps = 3/202 (1%) Strand=Plus/Plus Query 95656 GAACGAGAGCCTAGACGGCACGTTGGATTTGATAAGGCCTGTGACTACATCCACGGAGGG 95715 ||||| || | || || | ||||| |||||| | ||| |||| || | |||||| || Sbjct 605 GAACGCGATGCGGGAGGGAAGGTTGGCTTTGATGACGCCGGTGATGACGTTCACGGACGG 664 Query 95716 CCGCTGCGTCGCCAGGACGAGATGAATGCCGGCTGCGCGCGCCTTCTGGGCGATGCGGAC 95775 || ||||| || | || ||| ||||||||||| ||||| || || |||| ||| | Sbjct 665 GCGTTGCGTGGCGATGATGAGGTGAATGCCGGCGGCGCGGGCGAGTTGCGCGAGACGGGC 724 Query 95776 AATGTTGGCCTCGACTTCTTTCTTGTAGCCGCCCATCATGAGGTCTGCCAGCTCGTCGAC 95835 ||| | | |||| ||| | || || ||||||| | |||||| |||||||||| Sbjct 725 GATGCTCGTTTCGA--TCTCCGCCGGAG-CGACCATCATCAAGTCTGCGAGCTCGTCGAT 781 Query 95836 CACTACCACGATGTAGGGGAGT 95857 | | |||||||| || ||| Sbjct 782 GATGGCGACGATGTAAGGAAGT 803 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351574668657926