Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Beta_20vulgaris_20subsp._20vulgaris_20[refseq_20GCF_5F000511025.2_20 2015-07-07] 40,246 sequences; 566,550,431 total letters Query= NC_024354.1 Length=149162 Score E Sequences producing significant alignments: (Bits) Value seq27395 91.5 1e-13 seq13319 89.7 5e-13 seq22240 86.0 6e-12 seq33722 84.2 2e-11 >seq27395 Length=556 Score = 91.5 bits (100), Expect = 1e-13 Identities = 67/78 (86%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 146724 ACGGTGTATAGCGCAGCCTGGTAGCGCATCTGGTTTGGGACCAGAGGGTCGCTGGTTCGA 146783 |||| || ||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 243 ACGGAGTGTAGCGCAGCCTGGTAGCGCATCTGGTTTGGGACCAGAGGGTCGGGAGTTCGA 184 Query 146784 TTCCAGCTACACCGACCA 146801 || | || ||||||| Sbjct 183 ATCTCTCCACTCCGACCA 166 >seq13319 Length=735 Score = 89.7 bits (98), Expect = 5e-13 Identities = 67/78 (86%), Gaps = 2/78 (3%) Strand=Plus/Minus Query 146732 TAGCGCAGCCTGGTAGCGCATCTGGTTTGGGACCAGAGGGTCGCTGGTTCGATTCCAGCT 146791 |||||||||||||||||||||||| ||||||| ||||||||||| |||||| ||| || Sbjct 105 TAGCGCAGCCTGGTAGCGCATCTGCTTTGGGAGCAGAGGGTCGCGAGTTCGAATCCCGCC 46 Query 146792 ACACCGACCAAATTATTG 146809 | |||||| ||||||| Sbjct 45 GCTCCGACC--ATTATTG 30 >seq22240 Length=611 Score = 86.0 bits (94), Expect = 6e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 144251 TGCTGGATTAGCTCAGTAGGTAGAGCGCCTCACTTGTAATGAGGATGTCGCGGGTTCGAT 144310 ||| || |||||||||| ||||||||||| |||||| |||||||||||||||||| Sbjct 172 TGCCGGTTTAGCTCAGTTGGTAGAGCGCCAGTTTTGTAAACTGGATGTCGCGGGTTCGAT 231 Query 144311 TCCTGCATCCAGCACCA 144327 ||||||| || |||||| Sbjct 232 TCCTGCAACCGGCACCA 248 >seq33722 Length=501 Score = 84.2 bits (92), Expect = 2e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 144252 GCTGGATTAGCTCAGTAGGTAGAGCGCCTCACTTGTAATGAGGATGTCGCGGGTTCGATT 144311 || || |||||||||| ||||||||||| |||||| ||||||||||||||||||| Sbjct 81 GCCGGTTTAGCTCAGTTGGTAGAGCGCCAGTTTTGTAAACTGGATGTCGCGGGTTCGATT 140 Query 144312 CCTGCATCCAGCACCA 144327 |||||| || |||||| Sbjct 141 CCTGCAACCGGCACCA 156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476950337439520