Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Beta_20vulgaris_20subsp._20vulgaris_20[refseq_20GCF_5F000511025.2_20 2015-07-07] 40,246 sequences; 566,550,431 total letters Query= NC_024771.1 Length=151601 Score E Sequences producing significant alignments: (Bits) Value seq20580 104 2e-17 >seq20580 Length=631 Score = 104 bits (114), Expect = 2e-17 Identities = 149/207 (72%), Gaps = 5/207 (2%) Strand=Plus/Minus Query 107344 TGTTGATGAGGAGCACCCCCTGGAGGGCCCACTTTTCCAGGTAGCCGTGGGCGGGGAGGC 107403 |||||| | ||||| |||||| | ||||| ||||||| |||||||| |||| ||| Sbjct 381 TGTTGAGCAAAAGCACACCCTGGCGTGCCCAGCTTTCCAGAAAGCCGTGG-CGGGCGGGC 323 Query 107404 GAAATGCCGGGTAGGTCTT-TTGCACCGCCGCGTAGATGTTGCGCAGGCTTGGGGGAACT 107462 | ||||||| ||||| || || || ||| |||||| ||| || |||| Sbjct 322 GGAATGCCG---AGGTCGGCTTCCATTTCCTTGTAAATGTTGACCAGCGACGGCGGAATG 266 Query 107463 GGCACCCCCTTTCGCACGCTGAAAGCCAGCCCGTGCGCCTGGCCGGGGCCGTGGTAGGGG 107522 | |||||| |||||||||||| || ||||| ||||| |||| |||||| || || Sbjct 265 CGAACCCCCGGCCGCACGCTGAAACACAAGCCGTGAGCCTGACCGGCGCCGTGATACGGA 206 Query 107523 TCCTGGCCGACGATCACAACGCGCACC 107549 |||||||| | ||| || || | |||| Sbjct 205 TCCTGGCCAAGGATGACGACCCTCACC 179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 484751211039760