Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Beta_20vulgaris_20subsp._20vulgaris_20[refseq_20GCF_5F000511025.2_20 2015-07-07] 40,246 sequences; 566,550,431 total letters Query= NC_025115.1 Length=40002 Score E Sequences producing significant alignments: (Bits) Value seq24602 165 2e-36 >seq24602 Length=585 Score = 165 bits (182), Expect = 2e-36 Identities = 283/407 (70%), Gaps = 8/407 (2%) Strand=Plus/Plus Query 17748 GCGCATCATCCATAGATTGCTCAGGGCAAACAACGTATGTAACTGCTGCGTGTTCTTCAC 17807 ||||| |||||| |||||| ||| ||||||| ||| | | |||| ||||||||||| Sbjct 183 GCGCACCATCCACAGATTGGACAGCGCAAACAGCGTCTTGAGCTGCAGCGTGTTCTTCTT 242 Query 17808 CAAGCCTCGATAGCGCACCTTCAAATGCCCGAACTGGCGCTTGATGACCCGGAACGGATG 17867 ||| || || ||||||||||| | || ||||| |||||||| |||| ||| || || Sbjct 243 CAAACCCCGGTAGCGCACCTTGGTGTATCCAAACTGCCGCTTGATCACCCTGAAGGGGTG 302 Query 17868 TTCTACGCGAGCACGAATGCGCGCCTTGACCCGCTCCAACTCATCGACGAGCGCACCCGA 17927 ||| || || || ||||| ||||||| | |||| | ||| | | ||| | Sbjct 303 TTCCACCTTGGCTCGGATGCGGGCCTTGATCTTTTCCACTTGATCTAACAACGCGTCAAT 362 Query 17928 CACGGTGTT---CTTGTCCAAGGCGCGGCGTTTGCTCGGTCGCAATGCCACATGCCAACG 17984 |||||| ||||||||| | ||| |||| ||| |||| ||||||||||| Sbjct 363 GGGGGTGTTTTCCTTGTCCAACTCTTTGCGCTTGCCCGGGCGCATCGCCACATGCCAGGT 422 Query 17985 CACCTTCAACTTCTGCACCTCTTCGCGCTTGTCGATGCCCTGGTAGCCGGCATCGCCGAA 18044 || | |||| | || |||||||| ||| |||||||| ||||| || || Sbjct 423 GACAT---CCTTCCTGGCATCCGGGCGCTTGTGCGCGCCTTGGTAGCCTGCATCACCAAA 479 Query 18045 TACGTCGGCCTCCTTACCGTGCACCAA-CGCATGCGCTTGCGTCACGTCGTTGACGTTGG 18103 | || | |||| ||| || | ||| | ||| ||| || |||||| |||||| Sbjct 480 GGCATCCACTTCCTCACCATGGAGCAAGCTGTTGC-CTTCAGTGACGTCGGCTACGTTGC 538 Query 18104 CGGCCGTGCCCAGCACGGTATGCACCAGCCCCGAGTCCGCATCCACG 18150 | | ||||| | ||||| ||||||| |||||||||||||||||| Sbjct 539 CCGAGGTGCCAATGACGGTGTGCACCAATCCCGAGTCCGCATCCACG 585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127823681136528