Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Beta_20vulgaris_20subsp._20vulgaris_20[refseq_20GCF_5F000511025.2_20 2015-07-07] 40,246 sequences; 566,550,431 total letters Query= NC_025464.1 Length=44147 Score E Sequences producing significant alignments: (Bits) Value seq26327 345 1e-90 seq190 306 1e-78 seq20795 203 9e-48 seq96 203 9e-48 seq1964 174 4e-39 seq295 136 1e-27 seq22 134 4e-27 seq126 113 1e-20 seq57 109 2e-19 seq50 109 2e-19 seq223 104 7e-18 seq127 98.7 3e-16 seq170 91.5 4e-14 seq145 89.7 1e-13 >seq26327 Length=568 Score = 345 bits (382), Expect = 1e-90 Identities = 390/519 (75%), Gaps = 5/519 (1%) Strand=Plus/Minus Query 18817 TTCATTATTGCCTTCATTGCTGCACCTCCTGTAGACATTGATGGCATCCGCGAGCCTGTT 18876 || ||||| |||||||||||||| ||||| ||||| |||||||| || ||||| |||||| Sbjct 523 TTTATTATAGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGCGAACCTGTT 464 Query 18877 GCAGGCAGTCTTCTTTATGGAAACAACATCATATCGGGAGCCGTCGTTCCGAG--CAGCA 18934 | || ||| ||||| |||||||| || || || || ||| | |||| | | ||| Sbjct 463 TCCGGATCTCTACTTTACGGAAACAATATTATTTCTGGTGCCATTATTCCTACTTCTGCA 404 Query 18935 ATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAATTCACTTGATGAATGGCTCT 18994 || || || | ||||| || ||||| |||||||| || ||||||| ||| | | Sbjct 403 --GCTATTGGGTTGCACTTTTATCCAATATGGGAAGCGGCATCGGTTGATGAGTGGTTAT 346 Query 18995 ACAACGGGGGACCGTTCCAACTTGTGGTCTTCCACTTCCTCATTGGCGTCTATGCTTACA 19054 |||| || || || | | || | || | |||||| | |||| || | ||| | Sbjct 345 ACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTATA 286 Query 19055 TGGGACGCGAGTGGGAACTTAGCTATCGACTAGGGATGCGCCCTTGGATTTGTGTTGCCT 19114 |||| || |||||||||||||| | || || || ||||||||||||||| |||||| | Sbjct 285 TGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCAT 226 Query 19115 ACTCAGCTCCTGTTGCCGCAGCCTCTGCGGTCTTCCTTGTCTATCCATTTGGTCAAGGTT 19174 | |||||||| ||||| || || |||| || ||| | |||| ||| |||||||||| Sbjct 225 ATTCAGCTCCGGTTGCAGCGGCTACTGCTGTTTTCTTGATCTACCCAATTGGTCAAGGAA 166 Query 19175 CCTTTAGCGACGCTATGCCTTTGGGTATTAGTGGTACGTTCAACTACATGCTTGTATTCC 19234 |||| || | ||||||| | || || |||||| ||||||| ||| ||||||||| Sbjct 165 GCTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTTATGATTGTATTCC 106 Query 19235 AGGCTGAACATAACATCCTCATGCACCCGTTCCACATGCTCGGTGTCGCTGGTGTGTTCG 19294 ||||||| || |||||||| ||||| || || |||||| | ||||| |||||||| |||| Sbjct 105 AGGCTGAGCACAACATCCTTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCG 46 Query 19295 GCGGGTCACTATTTAGTGCGATGCACGGTTCGCTTGTTA 19333 |||| || ||||||||||| ||||| ||||| |||| || Sbjct 45 GCGGCTCCCTATTTAGTGCTATGCATGGTTC-CTTGGTA 8 >seq190 Length=503529 Score = 306 bits (338), Expect = 1e-78 Identities = 379/514 (74%), Gaps = 5/514 (1%) Strand=Plus/Minus Query 19188 TATGCCTTTGGGTATTAGTGGTACGTTCAACTACATGCTTGTATTCCAGGCTGAACATAA 19247 ||||||| | | | || ||||| ||||||| ||| |||||||||||||||| ||||| Sbjct 35690 TATGCCTCTAGTTCTT--TGGTATTTTCAACTTTATGATTGTATTCCAGGCTGAGCATAA 35633 Query 19248 CATCCTCATGCACCCGTTCCACATGCTCGGTGTCGCTGGTGTGTTCGGCGGGTCACTATT 19307 |||||| ||||||| || |||||| | ||||| |||||||| |||||||| || ||||| Sbjct 35632 CATCCTTGTGCACCCATTTCACATGTTAGGTGTAGCTGGTGTTTTCGGCGGCTCCCTATT 35573 Query 19308 TAGTGCGATGCACGGTTCGCTTGTTACGTCCTCGCTTGTGC-GTGAAACTACTGAAGAGG 19366 |||||| ||||| ||||| |||| || | || | ||| | | ||||| || || | | Sbjct 35572 TAGTGCTATGCATGGTTC-CTTGGTAACTTCTAGTTTGATCAGAGAAACCACATAAAATG 35514 Query 19367 TATCTCAGAACTATGGCTACAAGTTTGGGCAAGAAGAAGAGACTTATAACATTGTTGCTG 19426 |||| || | || |||| || || ||||| ||||| | ||||| || || || | Sbjct 35513 AATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAAATTATAT-ATCGTAGCCG 35455 Query 19427 CTCATGGGTATTTTGGTCGGCTTATTTTCCAGTACGCATCCTTCAACAATAGCCGTTCTC 19486 ||||||| |||||| |||| | || ||||| || || ||||||||| |||||| Sbjct 35454 CTCATGGTTATTTTCGTCGATTCATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTT 35395 Query 19487 TACATTTCTTTTTGGCTGCTTGGCCTGTGGTTGGCATTTGGTTTGCCGCCCTTGGGGTAA 19546 |||| || || || || ||||||||| | || || ||| |||| | || | || | | Sbjct 35394 TACACTTATTCTTAGCGGCTTGGCCTATAGTAGGTATTCAGTTTACTGCTTTAGGTATTA 35335 Query 19547 GCACCATGGCATTCAACTTGAATGGCTTTAACTTTAACCAGTCCCTTCTTGACAACAATG 19606 | || ||||| ||||| | ||||| || || || ||||| || | || | | || Sbjct 35334 GTACTATGGCTATCAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTAATAGTCTTG 35275 Query 19607 GTCGTGTCATTGATACTTGGGCTGACATTCTCAATCGTGCTAACCTCGGCTTTGAGGTAA 19666 ||||||||||| |||| | |||| | || | || ||||||||||| || | || || | Sbjct 35274 GTCGTGTCATTAATACCTAGGCTTATATCATTAACCGTGCTAACCTTGGTATGGAAGTTA 35215 Query 19667 TGCACGAACGTAATGCTCATAACTTCCCACTTGA 19700 |||| ||| ||||||||||||||||||| || || Sbjct 35214 TGCATGAATGTAATGCTCATAACTTCCCTCTAGA 35181 >seq20795 Length=630 Score = 203 bits (224), Expect = 9e-48 Identities = 264/362 (73%), Gaps = 5/362 (1%) Strand=Plus/Plus Query 19229 TATTCCAGGCTGAACATAACATCCTCATGCACCCGTTCCACATGCTCGGTGTCGCTGGTG 19288 ||||||||||||| || |||||||| ||||||||||| |||||| | ||||| | ||||| Sbjct 183 TATTCCAGGCTGAGCACAACATCCTTATGCACCCGTTTCACATGTTAGGTGTAGTTGGTG 242 Query 19289 TGTTCGGCGGGTCACTATTTAGTGCGATGCACGGTTCGCTTGTTACGTCCTCGCTTG-TG 19347 | ||||||| || || ||| |||| || || |||| |||| || | || | ||| | Sbjct 243 TATTCGGCGACTCCCTGTTTGGTGCTATACATAGTTC-CTTGGTAACTTCTAGTTTGATC 301 Query 19348 CGTGAAACTACTGAAGAGGTATCTCAGAACTATGGCTACAAGTTTGGGCAAGAAGAAGAG 19407 | |||| || || | | |||| || | || |||| || || ||||| ||||| Sbjct 302 AGGAAAACCACATAAAATGAATCTGCTAATGAAGGTTACATATTCGGTCAAGAGGAAGAA 361 Query 19408 ACTTATAACATTGTTGCTGCTCATGGGTATTTTGGTCGGCTTATTTTCCAGTACGCATCC 19467 |||||||| || || || |||||||| ||||||||||| | || ||||| || || Sbjct 362 ACTTATAATATCGTAGCCGCTCATGGTTATTTTGGTCGATTGATCTTCCAATATGCTAGT 421 Query 19468 TTCAACAATAGCCGTTCTCTACA---TTTCTTTTTGGCTGCTTGGCCTGTGGTTGGCATT 19524 ||||||||| |||||| |||| ||||| || | |||||||| ||| || | ||| Sbjct 422 TTCAACAATTCTCGTTCTTTACACTTATTCTTCTTAGTTGCTTGGCTTGTAGTATGTATT 481 Query 19525 TGGTTTGCCGCCCTTGGGGTAAGCACCATGGCATTCAACTTGAATGGCTTTAACTTTAAC 19584 |||||| | || | || | | || ||||| |||||| | ||||| || || || ||| Sbjct 482 TGGTTTACTGCTTTAGGTATTAATACTATGGCTTTCAACCTAAATGGTTTCAATTTCAAC 541 Query 19585 CA 19586 || Sbjct 542 CA 543 Score = 84.2 bits (92), Expect = 6e-12 Identities = 124/176 (70%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 19512 TGTGGTTGGCATTTGGTTTGCCGCCCTTGGGGTAAGCACCATGGCATTCAACTTGAATGG 19571 ||| || || ||||||||| | | | || | || | ||||| |||||| | ||||| Sbjct 1 TGTAGTCGGTATTTGGTTTACTACTTTAGGTATTAGTATTATGGCTTTCAACCTAAATGG 60 Query 19572 CTTTAACTTTAACCAGTCCCTTCTTGACAACAATGGTCGTGTCATTGATACTTGGGCTGA 19631 || || |||||||| | | ||| | | |||||||||||| || | |||||||| Sbjct 61 TTTCAATTTTAACCAATTTGTAGTTGGTAGTCAAGGTCGTGTCATTAATGCCTGGGCTGA 120 Query 19632 CATTCTCAATCGTGCTAACCTCGGCTTTGAGGTAATGCACGAACGTAATGCTCATA 19687 || | | || | |||| | || | || || ||||| |||||||||||||||| Sbjct 121 TATCATTATCCGGGATAACATTGGTATGGAAGTTATGCATGAACGTAATGCTCATA 176 >seq96 Length=52461754 Score = 203 bits (224), Expect = 9e-48 Identities = 279/388 (72%), Gaps = 4/388 (1%) Strand=Plus/Plus Query 18817 TTCATTATTGCCTTCATTGCTGCACCTCCTGTAGACATTGATGGCATCCGCGAGCCTGTT 18876 || ||||| |||||||||||||| ||||| ||||| ||| |||| || ||| | |||||| Sbjct 25270655 TTTATTATAGCCTTCATTGCTGCTCCTCCAGTAGATATTAATGGTATTCGCAAACCTGTT 25270714 Query 18877 GCAGGCAGTCTTCTTTATGGAAACAACATCATATCGGGAGCCGTCGTTCCGAG--CAGCA 18934 | || ||| ||||| |||||||| || || || || ||| | |||| | | ||| Sbjct 25270715 TCCGGATCTCTACTTTACGGAAACAATATTATTTCTGGTGCCATTATTCCTACTTCTGCA 25270774 Query 18935 ATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAATTCACTTGATGAATGGCTCT 18994 || ||||| | ||||| || ||||| |||||||| || ||||||| ||| | | Sbjct 25270775 --GCTATCGGGTTGCACTTTTATCCAATATGGGAAGCGGCATCGGTTGATGAGTGGTTAT 25270832 Query 18995 ACAACGGGGGACCGTTCCAACTTGTGGTCTTCCACTTCCTCATTGGCGTCTATGCTTACA 19054 |||| || || || | | || | || | |||||| | |||| || | |||| | Sbjct 25270833 ACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCTTCTTATA 25270892 Query 19055 TGGGACGCGAGTGGGAACTTAGCTATCGACTAGGGATGCGCCCTTGGATTTGTGTTGCCT 19114 |||| || |||||||||||||| | || || || ||| ||||||||||| |||||| | Sbjct 25270893 TGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGTGCCCTTGGATTGCTGTTGCAT 25270952 Query 19115 ACTCAGCTCCTGTTGCCGCAGCCTCTGCGGTCTTCCTTGTCTATCCATTTGGTCAAGGTT 19174 | |||||||| |||| || || |||| || ||| | |||| ||| ||| |||||| Sbjct 25270953 ATTCAGCTCCGGTTGTAGCGGCTACTGCTGTTTTCTTGATCTACCCAATTGCTCAAGGAA 25271012 Query 19175 CCTTTAGCGACGCTATGCCTTTGGGTAT 19202 |||| || | ||||||| | || || Sbjct 25271013 GCTTTTCTGATGGTATGCCTCTAGGAAT 25271040 Score = 183 bits (202), Expect = 9e-42 Identities = 188/244 (77%), Gaps = 5/244 (2%) Strand=Plus/Plus Query 19094 GCCCTTGGATTTGTGTTGCCTACTCAGCTCCTGTTGCCGCAGCCTCTGCGGTCTTCCTTG 19153 ||||||||||| |||||| || |||||||| |||| | || |||| || ||| | Sbjct 4492306 GCCCTTGGATTGCTGTTGCATATTCAGCTCCGGTTGTAACGGCTACTGCTGTTTTCTTGA 4492365 Query 19154 TCTATCC----ATTTGGTCAAGGTTCCTTTAGCGACGCTATGCCTTTGGGTATTAGTGGT 19209 |||| || | |||||||||| |||| || | ||||||||| || || |||| Sbjct 4492366 TCTACCCGGCCAATTGGTCAAGGAAGCTTTTTTGATGGTATGCCTTTAGGAATCTCTGGT 4492425 Query 19210 ACGTTCAACTACATGCTTGTATTCCAGGCTGAACATAACATCCTCATGCACCCGTTCCAC 19269 || ||||||| ||| ||||||| |||||||| || |||||||| |||||||| || ||| Sbjct 4492426 ACTTTCAACTTTATGATTGTATTTCAGGCTGAGCACAACATCCTTATGCACCCATTTCAC 4492485 Query 19270 ATGCTCGGTGTCGCTGGTGTGTTCGGCGGGTCACTATTTAGTGCGATGCACGGTTCGCTT 19329 ||| | ||||| | |||||| |||||||| || ||||||||||| ||||| ||||| ||| Sbjct 4492486 ATGTTAGGTGTAGTTGGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCATGGTTC-CTT 4492544 Query 19330 GTTA 19333 | || Sbjct 4492545 GGTA 4492548 >seq1964 Length=2038 Score = 174 bits (192), Expect = 4e-39 Identities = 205/275 (75%), Gaps = 2/275 (1%) Strand=Plus/Plus Query 19255 ATGCACCCGTTCCACATGCTCGGTGTCGCTGGTGTGTTCGGCGGGTCACTATTTAGTGCG 19314 ||| |||| || |||||| | ||||| | |||||| |||||||| | |||||||||| Sbjct 542 ATGAACCCATTTCACATGTTAGGTGTAGATGGTGTATTCGGCGGCTTCCTATTTAGTGTT 601 Query 19315 ATGCACGGTTCGCTTGTTACGTCCTCGCTTGTGC-GTGAAACTACTGAAGAGGTATCTCA 19373 ||| | ||||| |||| || | || | ||| | | ||||| || ||||| | |||| Sbjct 602 ATGTATGGTTC-CTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAGATGAATCTGC 660 Query 19374 GAACTATGGCTACAAGTTTGGGCAAGAAGAAGAGACTTATAACATTGTTGCTGCTCATGG 19433 || | || |||| || || ||||| ||||| |||||| | ||||| || | |||||| Sbjct 661 TAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACTTATGATATTGTAGCCGTTCATGG 720 Query 19434 GTATTTTGGTCGGCTTATTTTCCAGTACGCATCCTTCAACAATAGCCGTTCTCTACATTT 19493 ||||||||||| | || ||||| || || || |||||| | |||| |||| || Sbjct 721 TTATTTTGGTCGATTGATCTTCCAATATGCTAGTTTAAACAATTCTCATTCTTTACACTT 780 Query 19494 CTTTTTGGCTGCTTGGCCTGTGGTTGGCATTTGGT 19528 ||| || |||||||||||||| || |||||||||| Sbjct 781 CTTCTTAGCTGCTTGGCCTGTAGTAGGCATTTGGT 815 >seq295 Length=224868 Score = 136 bits (150), Expect = 1e-27 Identities = 242/349 (69%), Gaps = 3/349 (1%) Strand=Plus/Plus Query 18947 TACACTTCTACCCAATTTGGGAAGCTAATTCACT-TGATGAATGGCTCTACAACGGGGGA 19005 ||||||| || |||| |||||||| || | |||||| ||| | ||||| | || Sbjct 182508 TACACTTTTATTCAATATGGGAAGCAGCATCGATATGATGAGTGGTTATACAATGCTGGT 182567 Query 19006 CCGTTCCAACTTGTGGTCTTCCACTTCCTCATTGGCGTCTATGCTTACATGGGACGCGAG 19065 || | | || | || | |||||| | |||| || | ||| ||||| || ||| Sbjct 182568 CCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAACTTGTTATATGGGCCGTGAG 182627 Query 19066 TGGGAACTTAGCTATC-GACTAGGGATGCGCCCTTGGATTTGTGTTGCCTACTCAGCTCC 19124 ||| || |||| | || | ||| | | |||||||||||| |||||| || ||| |||| Sbjct 182628 TGGAAATTTAG-TGTCTGTCTAAGTAATCGCCCTTGGATTGCTGTTGCATATTCACCTCC 182686 Query 19125 TGTTGCCGCAGCCTCTGCGGTCTTCCTTGTCTATCCATTTGGTCAAGGTTCCTTTAGCGA 19184 ||||| || || |||| || ||| | | || ||| |||||||||| ||| | Sbjct 182687 GGTTGCAGCGGCTACTGCTGTTTTCTTGATTTACCCAATTGGTCAAGGAAGTTTTTCTAA 182746 Query 19185 CGCTATGCCTTTGGGTATTAGTGGTACGTTCAACTACATGCTTGTATTCCAGGCTGAACA 19244 | ||||| | | | || | |||| ||||||| ||| |||||||||| ||| | | Sbjct 182747 TGATATGCTTATAAGAATCTCTTGTACTTTCAACTTTATGATTGTATTCCAAGCTAAGTA 182806 Query 19245 TAACATCCTCATGCACCCGTTCCACATGCTCGGTGTCGCTGGTGTGTTC 19293 |||||||| || ||||| || |||||| | ||||| || |||| ||| Sbjct 182807 CAACATCCTTATCCACCCATTTCACATGTTAGGTGTAACTAGTGTATTC 182855 >seq22 Length=40393389 Score = 134 bits (148), Expect = 4e-27 Identities = 232/331 (70%), Gaps = 11/331 (3%) Strand=Plus/Plus Query 19381 GGCTACAAGTTTGGGCAAGAAGAAGAGACTTATAACATTGTTGCTGCTCATGGGTATTTT 19440 || ||||| || | ||||| || |||||||| || || | || |||| |||||| Sbjct 6368203 GGTTACAAATTCGATCAAGAGCAAATAACTTATAATATCGTAGTCGCACATGCTTATTTT 6368262 Query 19441 GGTCGGCTT-ATTTTCCAGTACGC-AT-CCTTCAACAATAGCCGTTCTCTACATTTCTTT 19497 ||||| || || ||||| || || || ||||||||||| |||| |||| ||||| Sbjct 6368263 GGTCGAATTGATCTTCCAATAAGCTATACCTTCAACAATTATGATTCTTTACACTTCTTC 6368322 Query 19498 TTGGCTGCTTGGCCTGTG----GTTGGCATTTGGTTTGCCGCCCTTGGGGTAAGCACCAT 19553 || | |||||| ||||| || || |||| |||| |||| | || | || || || Sbjct 6368323 TTAGTTGCTTGACCTGTATGTAGTAGGTATTTAGTTTACCGCTTTAGGTATTAGTACTAT 6368382 Query 19554 GGCATTCAACTTGAATGGCTTTAACTTTAACCAGTCCCTTCTTGACAACAATGGTCGTGT 19613 | ||||| | |||| || || || ||||| || | |||| | | |||||| | Sbjct 6368383 ATCCTTCAATCTAGATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTTT 6368442 Query 19614 CATTGATACTTGGGCTGACATTCT---CAATCGTGCTAACCTCGGCTTTG-AGGTAATGC 19669 ||| |||| ||| |||| ||| | ||| ||||| ||||| | | || | || ||| Sbjct 6368443 AATTAATACCTGGCCTGATATTATTATCAACCGTGCGAACCTTTGGTATGGAAGTTGTGC 6368502 Query 19670 ACGAACGTAATGCTCATAACTTCCCACTTGA 19700 |||| ||||||| |||||||||||| || || Sbjct 6368503 ACGATCGTAATGTTCATAACTTCCCCCTAGA 6368533 >seq126 Length=369524 Score = 113 bits (124), Expect = 1e-20 Identities = 150/207 (72%), Gaps = 1/207 (0%) Strand=Plus/Plus Query 19449 TATTTTCCAGTACGCATCCTTCAACAATAGCCGTTCTCTACATTTCTTTTTGGCTGCTTG 19508 ||| ||||| || || ||||||||| |||||| |||| ||||| || |||||||| Sbjct 171131 TATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACACTTCTTCTTAGCTGCTTG 171190 Query 19509 GCCTGTGGTTGGCATTTGGTTTGCCGCCCTTGGGGTAAGCACCATGGCATTCAACTTGAA 19568 ||||| || || ||||||||| || | || | || || ||||| ||||| | || Sbjct 171191 ACCTGTAGTAGGTATTTGGTTTTTTGCTTTAGGTATTAGTACTATGGCTTTCAATCTAAA 171250 Query 19569 TGGCTTTAACTTTAACCAGTCCCTTCTTGACAACAATGGTCGTGTCATTGATACTTGGGC 19628 ||| || || || ||||| || | |||| ||| |||||||||| | |||| |||| Sbjct 171251 TGGTTTCAATTTCAACCAATCTATAGTTGATGGCAA-GGTCGTGTCACTAATACCTGGGG 171309 Query 19629 TGACATTCTCAATCGTGCTAACCTCGG 19655 ||| || || ||||||||||| || Sbjct 171310 TGATATCAGTAACCGTGCTAACCTTGG 171336 >seq57 Length=33024243 Score = 109 bits (120), Expect = 2e-19 Identities = 114/150 (76%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 19381 GGCTACAAGTTTGGGCAAGAAGAAGAGACTTATAACATTGTTGCTGCTCATGGGTATTTT 19440 || |||| ||||| ||||| ||||| |||||||| | || || ||||||| |||||| Sbjct 2481607 GGTTACATATTTGGTCAAGAGGAAGAAACTTATAATTTCGTAGCCACTCATGGTTATTTT 2481666 Query 19441 GGTCGGCTTATTTTCCAGTACGCATCCTTCAACAATAGCCGTTCTCTACATTTCTTTTTG 19500 | || | || ||||| || || ||||||||| |||||| |||| ||||| || Sbjct 2481667 CGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACACTTCTTCTTA 2481726 Query 19501 GCTGCTTGGCCTGTGGTTGGCATTTGGTTT 19530 ||||||| |||| | || |||||||||||| Sbjct 2481727 GCTGCTTCGCCTTTAGTAGGCATTTGGTTT 2481756 >seq50 Length=1444883 Score = 109 bits (120), Expect = 2e-19 Identities = 131/176 (74%), Gaps = 4/176 (2%) Strand=Plus/Plus Query 18817 TTCATTATTGCCTTCATTGCTGCACCTCCTGTAGACATTGATGGCATCCGCGAGCCTGTT 18876 || ||||| |||||||||||||| ||||| ||||| |||||||| || ||||| |||||| Sbjct 509117 TTTATTATAGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGCGAACCTGTT 509176 Query 18877 GCAGGCAGTCTTCTTTATGGAAACAACATCATATCGGGAGCCGTCGTTCCGA--GCAGCA 18934 | || ||| ||||| |||||||| || || || || ||| | |||| | | ||| Sbjct 509177 TCCGGATCTCTACTTTACGGAAACAATATTATTTCTGGTGCCATTATTCCTACTTCTGCA 509236 Query 18935 ATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAATTCACTTGATGAATGG 18990 || || || | ||||| || ||||| |||||||| || ||||||| ||| Sbjct 509237 --GCTATTGGGTTGCACTTTTATCCAATATGGGAAGCGGCATCGGTTGATGAGTGG 509290 >seq223 Length=728060 Score = 104 bits (114), Expect = 7e-18 Identities = 146/205 (71%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 19119 AGCTCCTGTTGCCGCAGCCTCTGCG----GTCTTCCTTGTCTATCCATTTGGTCAAGGTT 19174 |||||| ||||| || || |||| || ||| | |||| || |||||||||| Sbjct 691472 AGCTCCGGTTGCAGCGGCTACTGCATGTTGTTTTCGTGATCTACTCAATTGGTCAAGGAA 691413 Query 19175 CCTTTAGCGACGCTATGCCTTTGGGTATTAGTGGTACGTTCAACTACATGCTTGTATTCC 19234 |||| || | |||| || || || ||| | || |||| ||| ||||||||| Sbjct 691412 GCTTTTCTGATGGTATGTCTCAAGGAATCTCTGGAATTTTTAACTTTATGATTGTATTCC 691353 Query 19235 AGGCTGAACATAACATCCTCATGCACCCGTTCCACATGCTCGGTGTCGCTGGTGTGTTCG 19294 ||||||| || |||||||| |||||||| | |||||| | || | |||||||| || | Sbjct 691352 AGGCTGAGCACAACATCCTTATGCACCCACTTCACATGTTAGGAATAGCTGGTGTATTTG 691293 Query 19295 GCGGGTCACTATTTAGTGCGATGCA 19319 ||| | |||||||||| ||||| Sbjct 691292 ACGGCTTCTTATTTAGTGCTATGCA 691268 >seq127 Length=60962716 Score = 98.7 bits (108), Expect = 3e-16 Identities = 160/227 (70%), Gaps = 4/227 (2%) Strand=Plus/Minus Query 19050 TTACATGGGACGCGAGTGGGAACTTAGCTATCGACTAGGGATGCGCCCTTGGATTTGTGT 19109 ||| ||||| || |||||| ||||||||| | | || |||| ||||| ||| ||| Sbjct 17471349 TTATATGGGTCGTGAGTGGAAACTTAGCTTCCATATGGGTATGCACCCTTATATTGTTGT 17471290 Query 19110 TGCCTACTCAGCTCCTGTTGCCGCAGCCTCTGCGGTC--TTCCTTG-TCTATCCATTTGG 19166 ||| || | |||||| |||| | || || | || || |||| |||| || |||| Sbjct 17471289 TGCATATTTAGCTCCAGTTGTAGAGGCGGCTACAGTTGTTTTCTTGATCTACCCGATTGG 17471230 Query 19167 TCAAGGTTC-CTTTAGCGACGCTATGCCTTTGGGTATTAGTGGTACGTTCAACTACATGC 19225 | || |||| | | ||||||||| | ||| |||||| ||||||| || Sbjct 17471229 TTAAAAAAAGCTTTTCTAATGATATGCCTTTAGAAATTTCTGGTACTTTCAACTTTATAA 17471170 Query 19226 TTGTATTCCAGGCTGAACATAACATCCTCATGCACCCGTTCCACATG 19272 |||||||||||||||| || || ||| | |||||||| || ||||| Sbjct 17471169 TTGTATTCCAGGCTGAGCACAATATCTTTATGCACCCATTTTACATG 17471123 Score = 98.7 bits (108), Expect = 3e-16 Identities = 75/89 (84%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 19606 GGTCGTGTCATTGATACTTGGGCTGACATTCTCAATCGTGCTAACCTCGGCTTTGAGGTA 19665 |||||||||||| |||| |||||||| || | || ||||||||||| || | || || Sbjct 49338939 GGTCGTGTCATTAATACCTGGGCTGATATCATTAACCGTGCTAACCTTGGTATGGAAGTT 49338880 Query 19666 ATGCACGAACGTAATGCTCATAACTTCCC 19694 ||||| ||||||||||||||||||||||| Sbjct 49338879 ATGCATGAACGTAATGCTCATAACTTCCC 49338851 >seq170 Length=38796167 Score = 91.5 bits (100), Expect = 4e-14 Identities = 124/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 19450 ATTTTCCAGTACGCATCCTTCAACAATAGCCGTTCTCTACATTTCTTTTTGGCTGCTTGG 19509 || ||||| || || |||||| || |||||| |||| ||||| || ||| ||||| Sbjct 2057931 ATCTTCCAATATGCTAGTTTCAACGATTCTCGTTCTTTACACTTCTTCTTAGCTACTTGG 2057990 Query 19510 CCTGTGGTTGGCATTTGGTTTGCCGCCCTTGGGGTAAGCACCATGGCATTCAACTTGAAT 19569 | ||| || || |||||||| | || | || | || || ||||| |||||| | ||| Sbjct 2057991 CTTGTAGTAGGTATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAACCTAAAT 2058050 Query 19570 GGCTTTAACTTTAACCAGTCCCTTCTTGACAACAATGGTCGTGTCATTGATAC 19622 || || || || ||||| || | |||| | | |||||||||||| |||| Sbjct 2058051 GGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTCATTAATAC 2058103 Score = 86.0 bits (94), Expect = 2e-12 Identities = 109/149 (73%), Gaps = 1/149 (1%) Strand=Plus/Plus Query 19552 ATGGCATTCAACTTGAATGGCTTTAACTTTAACCAGTCCCTTCTTGACAACAATGGTCGT 19611 ||||| |||||| | ||||| || || || ||||| || | |||| | | | |||| Sbjct 32379343 ATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGATCGT 32379402 Query 19612 GTCATTGATACTTGGGCTGACATTCTCAATCGTGCTAACCTCGGCTTTGAGGTAATGCAC 19671 || ||| |||| |||| ||| || | || | |||||||| || | || || ||||| Sbjct 32379403 GTAATTAATACCTGGG-TGATATCATTAACCATGCTAACCATGGTGTCGAAGTTATGCAT 32379461 Query 19672 GAACGTAATGCTCATAACTTCCCACTTGA 19700 |||| ||||||||||||||||| || || Sbjct 32379462 GAACACAATGCTCATAACTTCCCTCTAGA 32379490 >seq145 Length=44152522 Score = 89.7 bits (98), Expect = 1e-13 Identities = 108/142 (76%), Gaps = 4/142 (3%) Strand=Plus/Plus Query 18737 TAACCAGTACAGATAACCGTCTTTATATCGGCTGGTTTGGAACACTGATGATTCCGTGTC 18796 |||| || || || |||||||||||||| || |||||||| | ||||||| || | | Sbjct 40817889 TAACTAGCACTGAAAACCGTCTTTATATTGGATGGTTTGGTATTTTGATGATCCC-TACC 40817947 Query 18797 TCCTTG-CAGCTACTATTTGT-TTCATTATTGCCTTCATTGCTGCACCTCCTGTAGACAT 18854 | ||| | || ||| | ||| || ||||| |||||||||||||| ||||| | ||| || Sbjct 40817948 TTATTGACTGCAACT-TCTGTATTTATTATAGCCTTCATTGCTGCTCCTCCAGCAGATAT 40818006 Query 18855 TGATGGCATCCGCGAGCCTGTT 18876 | |||| || || ||| || || Sbjct 40818007 TCATGGTATTCGTGAGTCTTTT 40818028 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 141081341989068