Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Beta_20vulgaris_20subsp._20vulgaris_20[refseq_20GCF_5F000511025.2_20 2015-07-07] 40,246 sequences; 566,550,431 total letters Query= NC_028104.1 Length=73689 Score E Sequences producing significant alignments: (Bits) Value seq22 105 3e-18 >seq22 Length=40393389 Score = 105 bits (116), Expect = 3e-18 Identities = 136/185 (74%), Gaps = 2/185 (1%) Strand=Plus/Minus Query 65087 CGTGTTCCAAACTGACCATTTGGCATTAATAAATTAATATTGTTTGAACCAATAAAATTC 65146 ||||| |||||||| ||||| ||||| | | ||| || || || | ||| || ||| || Sbjct 6099148 CGTGTACCAAACTGTCCATTAGGCATGAGAAGATTGATGTTATTGGCACCTATGAAAGTC 6099089 Query 65147 TGAGCCATTCCGATAATTGCTGCATTTAAA-CTCGCTTCACCGTGATGATATCCTGAATG 65205 || ||||| || | ||| | | | | || ||||||||||| ||||| || ||| | Sbjct 6099088 TGTGCCATGCCAACAATGG-TACTCTGAATGCTCGCTTCACCATGATGGTAAGATGATTT 6099030 Query 65206 TTCAGAGACATATCCACTAAATTGAGCAACTTTTATTTCCGTTGTTAAATTCTTTTTAAA 65265 ||||| ||||| ||||| || ||||||||||| || ||| | || ||||| || || Sbjct 6099029 CTCAGATACATAACCACTGAACTGAGCAACTTTGATCTCCTTGACCAAGTTCTTCTTGAA 6098970 Query 65266 TGCAG 65270 ||||| Sbjct 6098969 TGCAG 6098965 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 235564399401900