Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Beta_20vulgaris_20subsp._20vulgaris_20[refseq_20GCF_5F000511025.2_20
2015-07-07] 40,246 sequences; 566,550,431 total letters
Query= NC_028672.1
Length=149732
Score E
Sequences producing significant alignments: (Bits) Value
seq10036 87.8 2e-12
seq22240 86.0 6e-12
seq33722 84.2 2e-11
>seq10036
Length=796
Score = 87.8 bits (96), Expect = 2e-12
Identities = 66/78 (85%), Gaps = 0/78 (0%)
Strand=Plus/Minus
Query 52356 CGGTGTATAGCGCAGTCTGGTAGCGCGAATGCTTTGGGAGCATTAGGTCGTTGGTTCGAG 52415
||| ||||||||||||||||||||||| ||||||||||||| | |||| |||||||
Sbjct 357 CGGGGTATAGCGCAGTCTGGTAGCGCGCCTGCTTTGGGAGCAGGATGTCGGGGGTTCGAA 298
Query 52416 TCCAACTACACCGACCAA 52433
||| |||| ||||||||
Sbjct 297 TCCCTCTACCCCGACCAA 280
>seq22240
Length=611
Score = 86.0 bits (94), Expect = 6e-12
Identities = 65/77 (84%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 50653 TGCTGGATTAGCTCAGTAGGTAGAGCGCCTCACTTGTAATGAGGATGTCGCGGGTTCGAT 50712
||| || |||||||||| ||||||||||| |||||| ||||||||||||||||||
Sbjct 172 TGCCGGTTTAGCTCAGTTGGTAGAGCGCCAGTTTTGTAAACTGGATGTCGCGGGTTCGAT 231
Query 50713 TCCTGCATCCAGCACCA 50729
||||||| || ||||||
Sbjct 232 TCCTGCAACCGGCACCA 248
>seq33722
Length=501
Score = 84.2 bits (92), Expect = 2e-11
Identities = 64/76 (84%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 50654 GCTGGATTAGCTCAGTAGGTAGAGCGCCTCACTTGTAATGAGGATGTCGCGGGTTCGATT 50713
|| || |||||||||| ||||||||||| |||||| |||||||||||||||||||
Sbjct 81 GCCGGTTTAGCTCAGTTGGTAGAGCGCCAGTTTTGTAAACTGGATGTCGCGGGTTCGATT 140
Query 50714 CCTGCATCCAGCACCA 50729
|||||| || ||||||
Sbjct 141 CCTGCAACCGGCACCA 156
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478773419830720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |