Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Beta_20vulgaris_20subsp._20vulgaris_20[refseq_20GCF_5F000511025.2_20 2015-07-07] 40,246 sequences; 566,550,431 total letters Query= NC_028768.1 Length=49714 Score E Sequences producing significant alignments: (Bits) Value seq13319 87.8 6e-13 seq27395 80.6 8e-11 >seq13319 Length=735 Score = 87.8 bits (96), Expect = 6e-13 Identities = 66/78 (85%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 36081 TGGTCGGAGTACTAGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCTACCT 36140 ||||||||| |||||||||| ||||||||||||||||||||||||||||||| Sbjct 36 TGGTCGGAGCGGCGGGATTCGAACTCGCGACCCTCTGCTCCCAAAGCAGATGCGCTACCA 95 Query 36141 GACTGCGCTACACTCCGA 36158 | ||||||||| |||||| Sbjct 96 GGCTGCGCTACGCTCCGA 113 >seq27395 Length=556 Score = 80.6 bits (88), Expect = 8e-11 Identities = 64/77 (83%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 36081 TGGTCGGAGTACTAGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCTACCT 36140 |||||||||| ||||||||| ||||||||| ||||||| ||||||||||||| Sbjct 166 TGGTCGGAGTGGAGAGATTCGAACTCCCGACCCTCTGGTCCCAAACCAGATGCGCTACCA 225 Query 36141 GACTGCGCTACACTCCG 36157 | ||||||||||||||| Sbjct 226 GGCTGCGCTACACTCCG 242 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 158887228108752