Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Beta_20vulgaris_20subsp._20vulgaris_20[refseq_20GCF_5F000511025.2_20 2015-07-07] 40,246 sequences; 566,550,431 total letters Query= NC_028827.1 Length=50165 Score E Sequences producing significant alignments: (Bits) Value seq27016 185 3e-42 >seq27016 Length=551 Score = 185 bits (204), Expect = 3e-42 Identities = 183/237 (77%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 40175 AAGTCGATGTCAACGTCGGGCATGGACACGCGCTCGGGGTTCAGGAACCGCTCGAAGATG 40234 ||||||||||| | ||||||||| || || || || || |||||||| |||||||| | Sbjct 536 AAGTCGATGTCGAAGTCGGGCATCGAAACCCGTTCCGGATTCAGGAAGCGCTCGAACAGC 477 Query 40235 AGCCCGTGCTCCAGTGGATCGAGGTCGGTGATCCCGAGGCAGTAGGCGACCAGCGAACCG 40294 | | | ||| || ||||| || ||||| || || || | || || ||||||||||| Sbjct 476 AAGTCATACTCAAGCGGATCAAGATCGGTAATGCCCAGTGAATACGCCACCAGCGAACCA 417 Query 40295 GCTGCCGAGCCTCGCCCAGGACCGACCCACACGCCGTTCTCCTTGGCCCAGCCGATGAAG 40354 || | || || || || ||||||||| ||| ||||| ||||||||||| ||||||| Sbjct 416 GCGCCGGAACCCCGGCCCGGACCGACCGGCACACCGTTGGCCTTGGCCCAGTTGATGAAG 357 Query 40355 TCGGCGACGACCAGGAAGTAGGACGGGAAGCCCATCTGGATGATCATGTCGATCTCG 40411 ||||| |||| |||||||||| |||||||||||||| ||| ||| |||||||| Sbjct 356 TCGGCCACGATCAGGAAGTAGCCGGGGAAGCCCATCTGTTGGATGATGCCGATCTCG 300 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160329738372804