Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Beta_20vulgaris_20subsp._20vulgaris_20[refseq_20GCF_5F000511025.2_20 2015-07-07] 40,246 sequences; 566,550,431 total letters Query= NC_028890.1 Length=162486 Score E Sequences producing significant alignments: (Bits) Value seq9315 87.8 2e-12 seq23080 82.4 8e-11 >seq9315 Length=809 Score = 87.8 bits (96), Expect = 2e-12 Identities = 62/70 (89%), Gaps = 1/70 (1%) Strand=Plus/Minus Query 28188 GGGTGTAGCTCAGATTGGCTAGAGCGCTTGCTTTGGGAGCAAGAAGTCGCAGGTTCAAGT 28247 ||||||||||||| |||| |||||||||| || |||| |||| ||||||||||||||| Sbjct 665 GGGTGTAGCTCAGCTTGG-TAGAGCGCTTCGTTCGGGACGAAGAGGTCGCAGGTTCAAGT 607 Query 28248 CCTGTCACCC 28257 |||||||||| Sbjct 606 CCTGTCACCC 597 >seq23080 Length=601 Score = 82.4 bits (90), Expect = 8e-11 Identities = 60/70 (86%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 28188 GGGTGTAGCTCAGATTGGCTAGAGCGCTTGCTTTGGGAGCAAGAAGTCGCAGGTTCAAGT 28247 ||| ||||||||| |||||||||| || ||||||||||| || ||||||||||||| | Sbjct 206 GGGCGTAGCTCAGCTTGGCTAGAGTGCCCGCTTTGGGAGCGGGAGGTCGCAGGTTCAAAT 147 Query 28248 CCTGTCACCC 28257 |||||| ||| Sbjct 146 CCTGTCGCCC 137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 519565687931360