Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Beta_20vulgaris_20subsp._20vulgaris_20[refseq_20GCF_5F000511025.2_20 2015-07-07] 40,246 sequences; 566,550,431 total letters Query= NC_028892.1 Length=49949 Score E Sequences producing significant alignments: (Bits) Value seq27016 143 8e-30 >seq27016 Length=551 Score = 143 bits (158), Expect = 8e-30 Identities = 174/237 (73%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 39082 AAGTCGATGTCCACGTCGGGCATGGAGACACGCTCAGGGTTCAGGAACCGCTCGAAGATG 39141 ||||||||||| | ||||||||| || || || || || |||||||| |||||||| | Sbjct 536 AAGTCGATGTCGAAGTCGGGCATCGAAACCCGTTCCGGATTCAGGAAGCGCTCGAACAGC 477 Query 39142 AGCCCGTGAGGGATGGGGTCCAGGTCGGTGATCCCGAGGGCGTACGCGGCCAGCGAGCCA 39201 | | | | || || || ||||| || || || | ||||| ||||||| ||| Sbjct 476 AAGTCATACTCAAGCGGATCAAGATCGGTAATGCCCAGTGAATACGCCACCAGCGAACCA 417 Query 39202 GCCGCAGAGCCGCGCCCAGGGCCGACCCACACGCCGTTCTCCTTCGCCCAGCCGATGAAG 39261 || | || || || || || |||||| ||| ||||| |||| |||||| ||||||| Sbjct 416 GCGCCGGAACCCCGGCCCGGACCGACCGGCACACCGTTGGCCTTGGCCCAGTTGATGAAG 357 Query 39262 TCGGCGACGACGAGGAAGTACGACGGGAACCCCATCTGGTTGATCATGTCGATCTCG 39318 ||||| |||| |||||||| ||||| |||||||| | ||| ||| |||||||| Sbjct 356 TCGGCCACGATCAGGAAGTAGCCGGGGAAGCCCATCTGTTGGATGATGCCGATCTCG 300 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 159638868711972