Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Beta_20vulgaris_20subsp._20vulgaris_20[refseq_20GCF_5F000511025.2_20 2015-07-07] 40,246 sequences; 566,550,431 total letters Query= NC_028906.1 Length=75933 Score E Sequences producing significant alignments: (Bits) Value seq26599 95.1 6e-15 >seq26599 Length=563 Score = 95.1 bits (104), Expect = 6e-15 Identities = 282/433 (65%), Gaps = 4/433 (1%) Strand=Plus/Plus Query 66518 CCGAGGGGCCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGT 66577 ||| | ||||| | || ||||| || || || ||| || || ||| | || || Sbjct 109 CCGCGCGGCCGCATCGTTGAAATTTATGGTCCTGAAAGCTCCGGCAAGACGACGCTTGCC 168 Query 66578 CTCCACGCGGTGGCCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAG 66637 || || || | ||| | || |||||| || |||| || | | |||| || || Sbjct 169 CTGCAGACGATCGCCGAAGCCCAGAAGAAGGGCGGCATTTGCGGTTTCGTCGATGCCGAA 228 Query 66638 CACTCCCTGGACCCTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTG 66697 ||| | || || || | || ||| |||||| || || || || || ||| || | Sbjct 229 CACGCGCTTGATCCGGTCTATGCCCGCAAGCTCGGCGTCGATCTTGAAAATCTCTTGATC 288 Query 66698 GTTCAGCCCGATACCGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGC 66757 ||||| ||||| ||||||||||| || || ||| ||| || || || || Sbjct 289 TCGCAGCCGGATACTGGCGAGCAGGCGCTTGAAATCACCGACACACTTGTGCGTTCGGGT 348 Query 66758 GAGCTGTCCATCGTCGTCGTTGACTCCGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAA 66817 | ||| | |||| | || || || || || || |||||||| || || ||||| Sbjct 349 GCGCTCGATGTTCTCGTGATCGATTCGGTTGCAGCACTCGTGCCGCGTGCTGAAATCGAA 408 Query 66818 GGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCACAGGCCATGCGC 66877 ||||| || || ||||| | ||||| || ||||| || ||| ||||| ||||| Sbjct 409 GGCGAGATGGGCGACAGCCTTCCGGGCCTCCAGGCGCGTCTGATGAGCCAGGCGCTGCGC 468 Query 66878 AAGCTCACTGGCACCATCTCCAGCACCAA-CACGCTGACGCTCTGGGTCAACCAGTTGCG 66936 ||||| || | | ||||||| | || || | | | ||| |||||||| | || Sbjct 469 AAGCTTACCGCTTCGATCTCCAAGTCGAAGCATGGTCA---TCTTCATCAACCAGATCCG 525 Query 66937 CGAGAAGATCGGC 66949 | |||||||||| Sbjct 526 CATGAAGATCGGC 538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242741677232964