Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Beta_20vulgaris_20subsp._20vulgaris_20[refseq_20GCF_5F000511025.2_20
2015-07-07] 40,246 sequences; 566,550,431 total letters
Query= NC_028906.1
Length=75933
Score E
Sequences producing significant alignments: (Bits) Value
seq26599 95.1 6e-15
>seq26599
Length=563
Score = 95.1 bits (104), Expect = 6e-15
Identities = 282/433 (65%), Gaps = 4/433 (1%)
Strand=Plus/Plus
Query 66518 CCGAGGGGCCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGT 66577
||| | ||||| | || ||||| || || || ||| || || ||| | || ||
Sbjct 109 CCGCGCGGCCGCATCGTTGAAATTTATGGTCCTGAAAGCTCCGGCAAGACGACGCTTGCC 168
Query 66578 CTCCACGCGGTGGCCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAG 66637
|| || || | ||| | || |||||| || |||| || | | |||| || ||
Sbjct 169 CTGCAGACGATCGCCGAAGCCCAGAAGAAGGGCGGCATTTGCGGTTTCGTCGATGCCGAA 228
Query 66638 CACTCCCTGGACCCTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTG 66697
||| | || || || | || ||| |||||| || || || || || ||| || |
Sbjct 229 CACGCGCTTGATCCGGTCTATGCCCGCAAGCTCGGCGTCGATCTTGAAAATCTCTTGATC 288
Query 66698 GTTCAGCCCGATACCGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGC 66757
||||| ||||| ||||||||||| || || ||| ||| || || || ||
Sbjct 289 TCGCAGCCGGATACTGGCGAGCAGGCGCTTGAAATCACCGACACACTTGTGCGTTCGGGT 348
Query 66758 GAGCTGTCCATCGTCGTCGTTGACTCCGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAA 66817
| ||| | |||| | || || || || || || |||||||| || || |||||
Sbjct 349 GCGCTCGATGTTCTCGTGATCGATTCGGTTGCAGCACTCGTGCCGCGTGCTGAAATCGAA 408
Query 66818 GGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCACAGGCCATGCGC 66877
||||| || || ||||| | ||||| || ||||| || ||| ||||| |||||
Sbjct 409 GGCGAGATGGGCGACAGCCTTCCGGGCCTCCAGGCGCGTCTGATGAGCCAGGCGCTGCGC 468
Query 66878 AAGCTCACTGGCACCATCTCCAGCACCAA-CACGCTGACGCTCTGGGTCAACCAGTTGCG 66936
||||| || | | ||||||| | || || | | | ||| |||||||| | ||
Sbjct 469 AAGCTTACCGCTTCGATCTCCAAGTCGAAGCATGGTCA---TCTTCATCAACCAGATCCG 525
Query 66937 CGAGAAGATCGGC 66949
| ||||||||||
Sbjct 526 CATGAAGATCGGC 538
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 242741677232964
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |