Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Beta_20vulgaris_20subsp._20vulgaris_20[refseq_20GCF_5F000511025.2_20 2015-07-07] 40,246 sequences; 566,550,431 total letters Query= NC_028976.1 Length=50113 Score E Sequences producing significant alignments: (Bits) Value seq27016 150 6e-32 >seq27016 Length=551 Score = 150 bits (166), Expect = 6e-32 Identities = 187/255 (73%), Gaps = 2/255 (1%) Strand=Plus/Minus Query 39515 AAGTCGATGTCCACGTCGGGCATGGAGACGCGCTCAGGGTTCAGGAACCGCTCGAAGATG 39574 ||||||||||| | ||||||||| || || || || || |||||||| |||||||| | Sbjct 536 AAGTCGATGTCGAAGTCGGGCATCGAAACCCGTTCCGGATTCAGGAAGCGCTCGAACAGC 477 Query 39575 AGCCCGTGAGGGATGGGGTCCAGGTCGGTGATCCCGAGGGCGTACGCGGCCAGCGAGCCA 39634 | | | | || || || ||||| || || || | ||||| ||||||| ||| Sbjct 476 AAGTCATACTCAAGCGGATCAAGATCGGTAATGCCCAGTGAATACGCCACCAGCGAACCA 417 Query 39635 GCCGCAGAGCCACGCCCAGGGCCGACCCACACACCGTTCTCCTTCGCCCAGCCGATGAAG 39694 || | || || || || || |||||| ||||||||| |||| |||||| ||||||| Sbjct 416 GCGCCGGAACCCCGGCCCGGACCGACCGGCACACCGTTGGCCTTGGCCCAGTTGATGAAG 357 Query 39695 TCGGCGACGACGAGGAAGTACGACGGGAACCCCATCTGGTTGATCATGTCGATCTCGTAG 39754 ||||| |||| |||||||| ||||| |||||||| | ||| ||| |||||||| | Sbjct 356 TCGGCCACGATCAGGAAGTAGCCGGGGAAGCCCATCTGTTGGATGATGCCGATCTCGAAT 297 Query 39755 TCGACCTGCGTTCGG 39769 || | | ||||||| Sbjct 296 TCAAGC--CGTTCGG 284 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160163417898900