Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Beta_20vulgaris_20subsp._20vulgaris_20[refseq_20GCF_5F000511025.2_20 2015-07-07] 40,246 sequences; 566,550,431 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq146 98.7 8e-16 >seq146 Length=1334862 Score = 98.7 bits (108), Expect = 8e-16 Identities = 156/224 (70%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 101024 CTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAA 101083 |||| ||||| ||| | ||||||||||| ||||| |||||||| || | |||| | | Sbjct 1120083 CTTAGCACCAAGTGAAGCGTTGATTCTTTCTGAATGTTGTAATCTGCGAGAGTTCTTCCA 1120024 Query 101084 TCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTG 101143 |||||||||||||| || || | || || | |||||| ||| || | ||||||||| Sbjct 1120023 TCTTCCAATTGTTTTCCGGCGAAAATCAGGCGTTGTTGATCTGGTGGAATTCCTTCTTTG 1119964 Query 101144 TCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATA 101203 || || ||| |||||| | | | | || || | || ||| | ||| || Sbjct 1119963 TCTTGGATCTTTGTTTTCACGTTGTCGATTGTATCGGAAGATTCCACTTCTAGGGTTATG 1119904 Query 101204 GTTTTGCCCGTCAATGTTTTAATAAAAATTTGCATTATTACAAT 101247 ||||| || || | ||||| | ||||| |||||| | | ||| Sbjct 1119903 GTTTTTCCAGTTAGGGTTTTCACGAAAATCTGCATTCTGAGAAT 1119860 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409459862145714