Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Beta_20vulgaris_20subsp._20vulgaris_20[refseq_20GCF_5F000511025.2_20 2015-07-07] 40,246 sequences; 566,550,431 total letters Query= NC_031007.1 Length=223935 Score E Sequences producing significant alignments: (Bits) Value seq30224 147 3e-30 >seq30224 Length=530 Score = 147 bits (162), Expect = 3e-30 Identities = 195/268 (73%), Gaps = 2/268 (1%) Strand=Plus/Plus Query 99184 CGAAGGCGTGCCGAAGAAAGACCGTACGGGAACCGGTACCCTGTCTATTTTCGGGCACCA 99243 ||| |||||| ||| | ||||| || || ||||| || ||||| | ||||| || || Sbjct 173 CGATGGCGTGGAAAAGCACGACCGCACCGGCACCGGAACGCTGTCGGTGTTCGGCCATCA 232 Query 99244 GATGCGTTTCAATCTGCAAGAAGGCTTTCCGCTGGTAACGACTAAGC-GCTGTCACATGC 99302 || ||| |||| || | ||| || |||||| | ||||| ||| ||| || | | Sbjct 233 GACGCGCCACAATTTGGCCGCAGGATTCCCGCTGCTCACGACCAAGAAGCTATCCC-TCA 291 Query 99303 GTTCGATTATTCACGAACTGCTGTGGTTCCTGAAAGGCGATACCAATGTCAAATATTTAA 99362 ||||| |||||||||||||| |||||||||| ||||||||||| |||| ||| | | Sbjct 292 AATCGATCATTCACGAACTGCTCTGGTTCCTGAGGGGCGATACCAACATCAAGTATCTCA 351 Query 99363 ATGATAATGGTGTAACTATTTGGGACGAATGGAAGAACAAAGATGGCGACCTCGGACCGG 99422 | || | || || | || |||||||| ||| | | | ||||||||||||| |||| Sbjct 352 AGGACCACGGCGTCTCGATCTGGGACGAGTGGGCGGATGAGAATGGCGACCTCGGTCCGG 411 Query 99423 TATACGGTAAACAGTGGCGGTCTTGGCC 99450 | || ||| |||||||| || ||||| Sbjct 412 TCTATGGTTCTCAGTGGCGCTCATGGCC 439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716103564873200